Gene detail

Detail information of GWHGAAZE031428

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002273145.3	0	PREDICTED: GPI ethanolamine phosphate transferase 3 [Vitis vinifera]
COG	YP_005093393.1	0.0000008	hypothetical protein GU3_14450
trEMBL	tr\|F6I3B9\|F6I3B9_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB61437.1}
TAIR10	AT5G17250.1	0	Alkaline-phosphatase-like family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	58777628	58787774	+
GWHAAZE00000009	mRNA	58777628	58787774	+
GWHAAZE00000009	exon	58777628	58777923	+
GWHAAZE00000009	exon	58778011	58778045	+
GWHAAZE00000009	exon	58778135	58778177	+
GWHAAZE00000009	exon	58778264	58778334	+
GWHAAZE00000009	exon	58778579	58778700	+
GWHAAZE00000009	exon	58780264	58780353	+
GWHAAZE00000009	exon	58780503	58780622	+
GWHAAZE00000009	exon	58780723	58780806	+
GWHAAZE00000009	exon	58781653	58781730	+
GWHAAZE00000009	exon	58782588	58782713	+
GWHAAZE00000009	exon	58782787	58782876	+
GWHAAZE00000009	exon	58783546	58783581	+
GWHAAZE00000009	exon	58784163	58784218	+
GWHAAZE00000009	exon	58784810	58784957	+
GWHAAZE00000009	exon	58786217	58786640	+
GWHAAZE00000009	exon	58786738	58786829	+
GWHAAZE00000009	exon	58787075	58787624	+
GWHAAZE00000009	exon	58787698	58787774	+
GWHAAZE00000009	CDS	58777628	58777923	+
GWHAAZE00000009	CDS	58778011	58778045	+
GWHAAZE00000009	CDS	58778135	58778177	+
GWHAAZE00000009	CDS	58778264	58778334	+
GWHAAZE00000009	CDS	58778579	58778700	+
GWHAAZE00000009	CDS	58780264	58780353	+
GWHAAZE00000009	CDS	58780503	58780622	+
GWHAAZE00000009	CDS	58780723	58780806	+
GWHAAZE00000009	CDS	58781653	58781730	+
GWHAAZE00000009	CDS	58782588	58782713	+
GWHAAZE00000009	CDS	58782787	58782876	+
GWHAAZE00000009	CDS	58783546	58783581	+
GWHAAZE00000009	CDS	58784163	58784218	+
GWHAAZE00000009	CDS	58784810	58784957	+
GWHAAZE00000009	CDS	58786217	58786640	+
GWHAAZE00000009	CDS	58786738	58786829	+
GWHAAZE00000009	CDS	58787075	58787624	+
GWHAAZE00000009	CDS	58787698	58787774	+

Transcript Sequence
>GWHTAAZE031464 ATGGTGCCGAATGAGAAGTGGATGGGAAGAAAATGGGTGTTTTTGGTGATTTTGGTTCTTCATTGCGTGGGTATATTGTTTTTCACTAGCGGTTTTCTACTCACTCGAACAGAACTTTCACATTATAGCCATTGCTCTGATGTTTCTGAGTCTCCTTGCTTCACTCCTCCATCTGCCAAACAACCACATGCATCATCTGAGGACCTCAACCATACCATTGCAGACCCTGGTTGTTGGACTCAACCTGCCGTTAATCGCCTTGTTATTATTGTTCTCGACGCTCTCAGGCATTACTTGTTTGATTTCGTTGCTCCCAGTACCTTTTTTGCAGTGAACCACTCATGGACAAAGAAAACAACTAAAATTGGCAATAAGGCAAACCCTGGAAGTGGGATTTGGTACAAAGCGCTTCCATCTTGGGGTTGCTTGCTAGTTGTTTACATTGAGAAAATGCCGTGGATGGACAAGTTACAAGTGCTACATAAACTTGCATCGCAACATGGATCATCTGCTAGGATTTTCAAAGCTGTTGCAGATCCACCTACTACGAGTTTACAACGTTTGAAGGGCTTGACAACTGGTGGACTTCCAACTTTTATTGACGTAGGAAATAGCTTTGGTGCTCCAGCAATTATTGAGGATAATTTGATATATCAGTTGGCTCAATCTGGAAAGCGGGTAGTAATGATGGGAGATGACACGTGGTTGCAGTTGTTTCCTTGTCATTTCAATAAATCTTATCCCTTTCCTTCTTTCAATGTCAAAGATCTTGATACGGTCGACAATGGGTGCATTGAACACCTACTTCCGTCCTTGTATGAAGAAGACTGGGATGTTCTCATAGCACATTTTCTTGGTGTGGATCATGCTGGGCATATATTTGGTGTTGATTCCACTCCGATGATAGAAAAACTGGAGCAATATAATGGTATTCTAGAGAAAGTTGTTGAAGTGCTGGAGAGCCAGTCTGGTCCTGATGGTTTGCATGAGAATACTTTACTTCTTGTGATGGGCGATCACGGCCAGACCCTAAATGGTGATCATGGTGGAGGGACTCCCGAAGAGGTTGAAACATCAATTTTCGCAATGAGTTTGAAAAAGCCTCCGCCTTCTGTTCCTTCGGAATTTGATGATTCATCTTGCCGATTAGATTTGGATGGAAGGAAGGTGTGCACTAGCTACATTGAACAGCTAGATTTTGCAGTAACAGTCTCAGCTCTGCTCGGTCTTCCCTTTCCTTATGGGAGCATTGGCCGTGTTAATCCTACACTGTATGCATTGGTTGCTGGTACATGGAGTCTGGACTGCTATGATGGGGGTAATTGCCCAGACCAATCAAAATTGGAGAAGTGGATGCACAATTATGCCAATGTACTCTGTATAAATTCTTGGCAGGTTAAAAAATACATTGATGTCTATTCAGCTTCGTCGGTTATCGGATTTTCAAAGGAAGACTTGTTGCATCTAGAACGTACATATGCTCGAGCAGTGGAGAATTGGTCCTGTTCTGGAAATGAAAGTTGTGATAATTCATTAACTACTCTCAAGATTCAAATTGATTCATATTCAAATTTCTTGGCAACGGTTGCTGAGTTGGCACGCACCAAATGGACCGAGTTTAATTTAGAGATGATGGGCATCGGTTTAGGCATTATGTTGACTTCAATAGTCATTCATTCATTTGCCATCAAGAGATTGGACAAGCTATGTGGAATCTCTTTTCCTTCCATCGGCAATTCAGGGATTTCTTTCAAGTTGATTTTTGCATGCATTGTAGTGATGATACATGCTTGCAGTTTCCTCTCAAATAGTTATATTTTGGAGGAAGGAAAAGTGGCAAGTTTTCTTTTGGCCAGTACTGGGATGCTATATCTACGTTACTCAGTAATGAGAAAGACAATGTTTATGGAAGCAATCGCATTTGTTCTTCTGATCTCCACCCTTAGATTTTCTATCGAACTTGGTTTATCAAAGCAAGGCGTTGATTCTATATTCATGAAGCTATATCCTTCATCGATTCTTGGTATTGACAAAGAGTCTCATATATGGATCTACATAGCTGATTTTGTACCAATGCTAGCTCTGATCCTATTGGCTTACATGCTATACAAGACCATTATTTGCAGCTCTTGTATGGGGATTTTAAAGTATGTTATTGGAGGAACTATATTAAATTATATGCTCGTAGCAGTCCATTGGGCCTTAGAAAGTAATCTGTTGAGTCCACCTCTGCTGCTTAAAGACATTAATGGAAATTATATTCCTCGGATAATCTATACTGTTGGTTTTGCACAACTGTTGACTCTATCATTCTTTCGACTTTTTAACAAAAGGAAGAGCTCTGATTGGGAAGGAATCATAACTATTAAAACAGTAGCCATGTTATCGACGTGGAGTTCGATAGTCATTATCTTGTCAGGAAGACAAGGACCTTTTGTTGCTTTAGCATCAATACTTGGAGACTTGTACACATTCTTTAAGCTTCTCTCATGCATCATTTTGTCTATTGAGCTTGGAAGTTGGAACAGTCATGATTAG

Network for GWHGAAZE031428

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01663.23	Phosphodiest	264	343	2.80E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05288	PIGO	Metabolic pathways	map01100
K05288	PIGO	Glycosylphosphatidylinositol	map00563

Gene Ontology

GO term	Ontology	Name
GO:0006506	biological_process	GPI anchor biosynthetic process
GO:0051377	molecular_function	mannose-ethanolamine phosphotransferase activity
GO:0003824	molecular_function	catalytic activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	8.800
	SRR3591706	second leaf	5.097
	SRR3591707	mature leaf	4.318
	SRR3591708	Shoot apex	8.958
	SRR3591709	Stem	6.285
	SRR3591710	White floral bud	4.199
	SRR3591711	White flower	3.704
	SRR3591712	Green floral bud	6.129
	SRR3591713	Yellow flower	2.867
SRP173429	SRR8316895	Juvenile bud stage	3.190
	SRR8316896	Juvenile bud stage	5.288
	SRR8316897	Juvenile bud stage	2.303
	SRR8316894	Third green stage	2.204
	SRR8316900	Third green stage	4.074
	SRR8316901	Third green stage	4.269
	SRR8316898	Complete white stage	0.481
	SRR8316899	Complete white stage	3.878
	SRR8316903	Complete white stage	0.997
	SRR8316902	Silver flowering stage	0.283
	SRR8316904	Silver flowering stage	0.659
	SRR8316905	Silver flowering stage	0.292
	SRR8316906	Gold flowering stage	1.453
	SRR8316907	Gold flowering stage	1.240
	SRR8316908	Gold flowering stage	0.527
SRP132670	SRR6706286	Control	2.742
	SRR6706287	Light intensity 50%	3.066
	SRR6706288	Light intensity 20%	3.697
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.113
	CNS0095593	Slightly white alabastrum(diploid) 2	2.953
	CNS0095594	Slightly white alabastrum(diploid) 3	2.098
	CNS0095595	Whole white alabastrum(diploid) 2	2.601
	CNS0095596	Whole white alabastrum(diploid) 3	2.781
	CNS0095597	Whole white alabastrum(diploid) 4	2.262
	CNS0095598	Silvery flower (diploied) 1	2.788
	CNS0095599	Silvery flower (diploied) 2	2.940
	CNS0095600	Silvery flower (diploied) 3	1.389
	CNS0095601	Golden flower (diploid) 1	1.347
	CNS0095602	Golden flower (diploid) 2	1.355
	CNS0095603	Golden flower (diploid) 3	1.573
	CNS0095604	Slightly white alabastrum(tetraploid) 1	3.355
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.178
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.893
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.193
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.467
	CNS0095609	Whole white alabastrum(tetraploid) 3	3.482
	CNS0095610	Silvery flower (tetraploid) 1	0.432
	CNS0095611	Silvery flower (tetraploid) 2	0.745
	CNS0095612	Silvery flower (tetraploid) 3	0.568
	CNS0095613	Golden flower (tetraploid) 1	0.154
	CNS0095614	Golden flower (tetraploid) 2	0.412
	CNS0095615	Golden flower (tetraploid) 3	0.107
CRA001975	CRR073297	Stem 1	3.008
	CRR073298	Stem 2	2.257
	CRR073299	Stem 3	2.887
	CRR073300	Leaf 1	3.196
	CRR073301	Leaf 2	2.975
	CRR073302	Leaf 3	2.237
	CRR073303	Juvenile bud 1	1.351
	CRR073304	Juvenile bud 2	0.574
	CRR073305	Juvenile bud 3	1.324
	CRR073306	Third green 1	0.058
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.108
	CRR073309	Second white 1	0.047
	CRR073310	Second white 2	0.228
	CRR073311	Second white 3	0.041
	CRR073312	Silver flowering 1	0.178
	CRR073313	Silver flowering 2	0.028
	CRR073314	Silver flowering 3	0.160
	CRR073315	Gold flowering 1	0.617
	CRR073316	Gold flowering 2	1.272
	CRR073317	Gold flowering 3	0.499
	CRR073318	Tawny withering 1	1.716
	CRR073319	Tawny withering 2	1.411
	CRR073320	Tawny withering 3	1.428