Gene detail

Detail information of GWHGAAZE031467

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011093376.1	0	PREDICTED: putative glucose-6-phosphate 1-epimerase [Sesamum indicum]
COG	YP_002355684.1	1E-58	aldose 1-epimerase
Swissprot	tr\|Q40784\|AAPC_CENCI	6E-152	Putative glucose-6-phosphate 1-epimerase
trEMBL	tr\|A0A061DSV6\|A0A061DSV6_THECC	0	Galactose mutarotase-like superfamily protein {ECO:0000313\|EMBL:EOX95795.1}
TAIR10	AT3G61610.1	1E-143	Galactose mutarotase-like superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	59288479	59292125	-
GWHAAZE00000009	mRNA	59288479	59292125	-
GWHAAZE00000009	exon	59291876	59292125	-
GWHAAZE00000009	exon	59291129	59291683	-
GWHAAZE00000009	exon	59290662	59290736	-
GWHAAZE00000009	exon	59290178	59290234	-
GWHAAZE00000009	exon	59289894	59290057	-
GWHAAZE00000009	exon	59289642	59289803	-
GWHAAZE00000009	exon	59289417	59289519	-
GWHAAZE00000009	exon	59288964	59289063	-
GWHAAZE00000009	exon	59288479	59288684	-
GWHAAZE00000009	five_prime_UTR	59291876	59292125	-
GWHAAZE00000009	five_prime_UTR	59291240	59291683	-
GWHAAZE00000009	CDS	59291129	59291239	-
GWHAAZE00000009	CDS	59290662	59290736	-
GWHAAZE00000009	CDS	59290178	59290234	-
GWHAAZE00000009	CDS	59289894	59290057	-
GWHAAZE00000009	CDS	59289642	59289803	-
GWHAAZE00000009	CDS	59289417	59289519	-
GWHAAZE00000009	CDS	59288964	59289063	-
GWHAAZE00000009	CDS	59288479	59288684	-

Transcript Sequence
>GWHTAAZE031503 CTTCTCCCCCCGGCTAAAAAGAATCCATTTTTTCATCTTTCTTTATTCTCCATTTCTCCTCCTCCCATGTTTTCACAATCTTGCCTGCTAAACCCAACTTTGTTATTAATTTATTTTTTTGCCTTAATTTTTTAAATAAATCTCAATCCCACTTAATTAATGCACAATTTACTCCTCTCTCTATTAGTTGTGCATCGAACTCCATTCCCTTTCAACATCCACAGTGTGTAACTTTCATTCAAAACTTCAGAGTTGGTGAAATTTTGGAGTTGAAGCATTTCTGTTCATTTGCCACTTGTTATTCTTTGTTGGGATTTTCTTTGGGTGAAGGCTAAGGGAATGGGATTGCTCTTAAGTATATATACATTTTGGGGGGTTTCTTGATTTAGGGTTTTCTTTTGGATCTGAGGGCACTATGGTGGGGGCAATGTTGGGAAACTTGATTTGGTAGGTGGGTTTTCTCTTTCTTTAAATTTAATGCACAAGATTACAAGTAATTCACATGAAAGGGGTTTTCAGTTCAAATTTCAACTGCCCTAAGTGACATTTGTCTCCGTATGGTAACTGGTGTGGGCATTGGGAAAGTTTTTATTGGGGCTTAGACAGAGAGAAAGAGGGAGATAGTCTTTCAGATTTGAAATAGTGAGAGAAGAATCAAAAGAAAATTTGTGGGTTTGGTTTAGTGATTTGTGAAATGGGACATTCTGCAGCAGTTTGGGATTATAGGGCAGCAATTGAGATGACAAAGGATTGGAATGGAATGGACCAGGTTGTAATTCGGAACCCGCAAGGGGCTTCAGCGCGGGTTAGCTTGCATGGAGGACAAGTCACTTCGTGGCGGACTGATCGAGGTGAAGAACTTTTGTTCACCAGCAATAAGGCAATCTTTAAGCCCCCAAAAGCAATGCGAGGAGGAATACCAATTTGTTTTCCGCAGTTTGGTAACTGTGGTTCACTTGAGCAACATGGATTTGCAAGGAACAAAATCTGGACCATTGATGATGATCCTCCACCTCTTCACCCAAATGATTCTCAGGGGAAATCTTTCATCGATTTGCTACTCAAACCATCTGAAGAAGATCTCAAGTGTTGGCCTCATAGGACTGTTATCTTATTTTCCTTTCTCAGCTTTGAGTTTCGTCTTAGGGTCGCCCTTGCATCGGATGGGAACCTCACTATGATATCGCGCATTAGGAACATCAATGGCAAGCCATTTAGTTTCTCATTTGCTTATCATACATATTTGTCTGTTTCTGACATAAGTGAAGTGAGGATAGAAGGACTGGAAACATTGGACTATCTAGACAACCTTAGCCAAAGGGAACGCTTCACTGAACAAGGAGATGCAATAACTTTTGAATCTGAGGTGGACCGAGTTTATCTTAGATCTCCGAATTGTGTAGCTGTTCTTGATCATGAAAGGAAACGGACATATGTACTAAAGAAGGAAGGGCTGCCGGATGTAGTGGTGTGGAATCCATGGGAGAAGAAATCGAAATCAATGACGGATTTTGGGGATGAGGAGTACAAACAAATGCTTTGCGTGGACGCAGCAGCTTTAGAGAAAGCCATCACTTTGAAGCCAGGAGAGGAATGGACAGGCCGGTTGGAGCTTGCGGTGGTGCCTTCAAGTTTTTGCAGTGAGGACCTTGACCCTCAGTGGAGCCTTTAA

Network for GWHGAAZE031467

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01263.21	Aldose_epim	24	307	1.70E-65

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01792	E5.1.3.15	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Glycolysis / Gluconeogenesis	map00010

Gene Ontology

GO term	Ontology	Name
GO:0005975	biological_process	carbohydrate metabolic process
GO:0030246	molecular_function	carbohydrate binding
GO:0003824	molecular_function	catalytic activity
GO:0016853	molecular_function	isomerase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	23.383
	SRR3591706	second leaf	14.853
	SRR3591707	mature leaf	6.740
	SRR3591708	Shoot apex	25.133
	SRR3591709	Stem	17.751
	SRR3591710	White floral bud	19.719
	SRR3591711	White flower	18.304
	SRR3591712	Green floral bud	19.813
	SRR3591713	Yellow flower	15.396
SRP173429	SRR8316895	Juvenile bud stage	24.232
	SRR8316896	Juvenile bud stage	19.826
	SRR8316897	Juvenile bud stage	10.946
	SRR8316894	Third green stage	10.261
	SRR8316900	Third green stage	32.953
	SRR8316901	Third green stage	25.209
	SRR8316898	Complete white stage	21.003
	SRR8316899	Complete white stage	37.822
	SRR8316903	Complete white stage	34.145
	SRR8316902	Silver flowering stage	4.948
	SRR8316904	Silver flowering stage	8.556
	SRR8316905	Silver flowering stage	4.562
	SRR8316906	Gold flowering stage	10.106
	SRR8316907	Gold flowering stage	8.102
	SRR8316908	Gold flowering stage	9.590
SRP132670	SRR6706286	Control	21.089
	SRR6706287	Light intensity 50%	19.660
	SRR6706288	Light intensity 20%	20.664
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	20.389
	CNS0095593	Slightly white alabastrum(diploid) 2	20.530
	CNS0095594	Slightly white alabastrum(diploid) 3	16.659
	CNS0095595	Whole white alabastrum(diploid) 2	15.551
	CNS0095596	Whole white alabastrum(diploid) 3	18.494
	CNS0095597	Whole white alabastrum(diploid) 4	15.732
	CNS0095598	Silvery flower (diploied) 1	16.013
	CNS0095599	Silvery flower (diploied) 2	13.312
	CNS0095600	Silvery flower (diploied) 3	15.944
	CNS0095601	Golden flower (diploid) 1	11.780
	CNS0095602	Golden flower (diploid) 2	9.165
	CNS0095603	Golden flower (diploid) 3	8.123
	CNS0095604	Slightly white alabastrum(tetraploid) 1	17.389
	CNS0095605	Slightly white alabastrum(tetraploid) 2	14.874
	CNS0095606	Slightly white alabastrum(tetraploid) 3	33.052
	CNS0095607	Whole white alabastrum(tetraploid) 1	10.548
	CNS0095608	Whole white alabastrum(tetraploid) 2	10.413
	CNS0095609	Whole white alabastrum(tetraploid) 3	18.263
	CNS0095610	Silvery flower (tetraploid) 1	14.523
	CNS0095611	Silvery flower (tetraploid) 2	12.040
	CNS0095612	Silvery flower (tetraploid) 3	22.360
	CNS0095613	Golden flower (tetraploid) 1	3.866
	CNS0095614	Golden flower (tetraploid) 2	6.092
	CNS0095615	Golden flower (tetraploid) 3	5.322
CRA001975	CRR073297	Stem 1	41.708
	CRR073298	Stem 2	28.999
	CRR073299	Stem 3	22.155
	CRR073300	Leaf 1	28.849
	CRR073301	Leaf 2	24.950
	CRR073302	Leaf 3	19.056
	CRR073303	Juvenile bud 1	22.206
	CRR073304	Juvenile bud 2	14.789
	CRR073305	Juvenile bud 3	27.485
	CRR073306	Third green 1	5.154
	CRR073307	Third green 2	5.167
	CRR073308	Third green 3	6.490
	CRR073309	Second white 1	2.092
	CRR073310	Second white 2	3.115
	CRR073311	Second white 3	3.264
	CRR073312	Silver flowering 1	2.351
	CRR073313	Silver flowering 2	2.379
	CRR073314	Silver flowering 3	4.443
	CRR073315	Gold flowering 1	1.879
	CRR073316	Gold flowering 2	3.382
	CRR073317	Gold flowering 3	2.228
	CRR073318	Tawny withering 1	15.147
	CRR073319	Tawny withering 2	11.189
	CRR073320	Tawny withering 3	16.295