Gene detail

Detail information of GWHGAAZE031607

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU27190.1	7.11288E-72	hypothetical protein MIMGU_mgv1a007505mg [Erythranthe guttata]
Swissprot	tr\|Q3EBM5\|ASPR1_ARATH	1E-41	Probable aspartic protease At2g35615 (Precursor)
trEMBL	tr\|A0A022QL16\|A0A022QL16_ERYGU	3E-72	Uncharacterized protein {ECO:0000313\|EMBL:EYU27190.1}
TAIR10	AT1G64830.1	3E-40	Eukaryotic aspartyl protease family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	61590743	61592052	-
GWHAAZE00000009	mRNA	61590743	61592052	-
GWHAAZE00000009	exon	61590743	61590945	-
GWHAAZE00000009	exon	61591024	61591188	-
GWHAAZE00000009	exon	61591392	61592052	-
GWHAAZE00000009	CDS	61591392	61592052	-
GWHAAZE00000009	CDS	61591024	61591188	-
GWHAAZE00000009	CDS	61590743	61590945	-

Transcript Sequence
>GWHTAAZE031643 ATGACAACAATGTTGACATTTCACCAAATTTTCTCCATCATACTTGTAGGTACAATTCCCATTTTTTGTACCTCAAAGTCCTCACTTGTCGTAGAAGCTAAAAATGTTGGGTTCAATGTGGATCTTGTCCATCGCGATTCGCCAAAATCTCCCTTTTATAATCATTCTCTAACTCCTTCACAACGTGTGGCTGCTGCTCTACGTCGATCACTTCAGAGAATTGTACTGTTAAAGAATGGCTCAACCCCTATAATCCCAGATCTCGGGGAATTTCTCATGAAGATATCCTTCGGCACACCACCAGTTGATGTACTACCAGTTGCCGATACTGGTAGCGACCTAACATGGATACAATGCGAGCCTTGCCCTAATTGTACGAAGCAAATTAATCCTCCCATCTTTAATCCATATAATTCATTAACTTACAAAGCGGTCCCTTGTACCTCTGAACTTTGCCATTCTATGCCTGAAACTTCTTGCAATGCTACTACAAATACTTGCCACTATTCAGTCTCGTACGTAGACAAGTCCGTTAGTCATGGAGATCTTGCTACTGACATAGTTGCATTTGATCCCCCCGTTAGTACTTTCCCTCGTATCTTTTTTGGGTGTGCGAATGGCGATGCAAGATCCGGCGTAGTTGGCCTTGGTGGCGGGCCAGAGGATAATCATCCCGAACCACCAGGGTCCGCGGGACTTCCCAAAGAGGGAAACACGATTATCGACACAGGGACGACATTGACTAATCTTCCATTAGATATTTACAATCAATTTGAAGCCGCGATTAAAAAAGAGGTGAAATTGTCACCTGTGGATGACCCACAAGGTTTTAAGAGAGAAGATTTGAGACTGACTCCACCGAATACATTTGTTCAGACCAGTGATACTACTATGTGTTTGGCTTTTTCGCCTACTGAAAATGACAAACCAGCTGTTTTGGGAAATTTTGCACAGAAGAATATATTTGTTAGCTATGACCTAGAGAAGAAAACTGTGTCGTTTAGGCATACAGATTGTGAAAAAGAATGA

Network for GWHGAAZE031607

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0252

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14543.7	TAXi_N	91	220	9.60E-35
PF14541.7	TAXi_C	280	335	3.80E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	biological_process	proteolysis
GO:0004190	molecular_function	aspartic-type endopeptidase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.058
	SRR3591706	second leaf	0.527
	SRR3591707	mature leaf	0.040
	SRR3591708	Shoot apex	0.295
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.095
	SRR3591711	White flower	0.011
	SRR3591712	Green floral bud	0.101
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.290
	SRR8316896	Juvenile bud stage	0.080
	SRR8316897	Juvenile bud stage	0.049
	SRR8316894	Third green stage	0.113
	SRR8316900	Third green stage	0.150
	SRR8316901	Third green stage	0.197
	SRR8316898	Complete white stage	0.072
	SRR8316899	Complete white stage	0.142
	SRR8316903	Complete white stage	0.079
	SRR8316902	Silver flowering stage	0.013
	SRR8316904	Silver flowering stage	0.003
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.067
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.158
	SRR6706287	Light intensity 50%	0.105
	SRR6706288	Light intensity 20%	0.042
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.106
	CNS0095593	Slightly white alabastrum(diploid) 2	0.072
	CNS0095594	Slightly white alabastrum(diploid) 3	0.123
	CNS0095595	Whole white alabastrum(diploid) 2	0.111
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.058
	CNS0095598	Silvery flower (diploied) 1	0.065
	CNS0095599	Silvery flower (diploied) 2	0.083
	CNS0095600	Silvery flower (diploied) 3	0.020
	CNS0095601	Golden flower (diploid) 1	0.062
	CNS0095602	Golden flower (diploid) 2	0.054
	CNS0095603	Golden flower (diploid) 3	0.048
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.063
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.482
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.035
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.051
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.008
	CNS0095612	Silvery flower (tetraploid) 3	0.036
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.525
	CRR073298	Stem 2	0.193
	CRR073299	Stem 3	0.383
	CRR073300	Leaf 1	0.332
	CRR073301	Leaf 2	0.474
	CRR073302	Leaf 3	0.147
	CRR073303	Juvenile bud 1	0.041
	CRR073304	Juvenile bud 2	0.107
	CRR073305	Juvenile bud 3	0.149
	CRR073306	Third green 1	0.031
	CRR073307	Third green 2	0.016
	CRR073308	Third green 3	0.020
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.023
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.034