Detail information of GWHGAAZE031636


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011086940.10PREDICTED: cyclic pyranopterin monophosphate synthase, mitochondrial [Sesamum indicum]
COGYP_003291481.13E-141molybdenum cofactor biosynthesis protein A
Swissprottr|Q39055|CNX2_ARATH0Cyclic pyranopterin monophosphate synthase, mitochondrial (Precursor)
trEMBLtr|A0A068UJ97|A0A068UJ97_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_27 {ECO:0000313|EMBL:CDP07673.1}
TAIR10AT2G31955.28E-173cofactor of nitrate reductase and xanthine dehydrogenase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6207219362075061-
GWHAAZE00000009mRNA6207219362075061-
GWHAAZE00000009exon6207453162075061-
GWHAAZE00000009exon6207384162074008-
GWHAAZE00000009exon6207321662073404-
GWHAAZE00000009exon6207283262072900-
GWHAAZE00000009exon6207219362072276-
GWHAAZE00000009CDS6207453162075061-
GWHAAZE00000009CDS6207384162074008-
GWHAAZE00000009CDS6207321662073404-
GWHAAZE00000009CDS6207283262072900-
GWHAAZE00000009CDS6207219362072276-
Transcript Sequence

Network for GWHGAAZE031636

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04055.22Radical_SAM361979.10E-33
PF13353.7Fer4_12381425.60E-07
PF06463.14Mob_synth_C2033282.40E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03639moaA, CNX2 Metabolic pathways map01100
Folate biosynthesismap00790
Sulfur relay systemmap04122

Gene Ontology

GO term OntologyName
GO:0006777biological_processMo-molybdopterin cofactor biosynthetic process
GO:0019008cellular_componentmolybdopterin synthase complex
GO:0003824molecular_functioncatalytic activity
GO:0051536molecular_functioniron-sulfur cluster binding
GO:0051539molecular_function4 iron, 4 sulfur cluster binding
GO:0046872molecular_functionmetal ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.791
SRR3591706second leaf8.410
SRR3591707mature leaf8.260
SRR3591708Shoot apex9.158
SRR3591709Stem6.528
SRR3591710White floral bud12.877
SRR3591711White flower20.241
SRR3591712Green floral bud9.164
SRR3591713Yellow flower20.459
SRP173429 SRR8316895Juvenile bud stage 5.163
SRR8316896Juvenile bud stage 7.167
SRR8316897Juvenile bud stage 2.578
SRR8316894Third green stage 3.384
SRR8316900Third green stage 9.033
SRR8316901Third green stage 8.437
SRR8316898Complete white stage 6.034
SRR8316899Complete white stage 14.923
SRR8316903Complete white stage 10.904
SRR8316902Silver flowering stage10.649
SRR8316904Silver flowering stage13.374
SRR8316905Silver flowering stage7.524
SRR8316906Gold flowering stage 21.913
SRR8316907Gold flowering stage 15.982
SRR8316908Gold flowering stage 20.184
SRP132670SRR6706286Control7.620
SRR6706287Light intensity 50%7.129
SRR6706288Light intensity 20%7.203
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.314
CNS0095593Slightly white alabastrum(diploid) 27.149
CNS0095594Slightly white alabastrum(diploid) 38.204
CNS0095595Whole white alabastrum(diploid) 25.888
CNS0095596Whole white alabastrum(diploid) 36.670
CNS0095597Whole white alabastrum(diploid) 45.738
CNS0095598Silvery flower (diploied) 18.226
CNS0095599Silvery flower (diploied) 27.115
CNS0095600Silvery flower (diploied) 317.528
CNS0095601Golden flower (diploid) 18.801
CNS0095602Golden flower (diploid) 214.110
CNS0095603Golden flower (diploid) 314.144
CNS0095604Slightly white alabastrum(tetraploid) 17.959
CNS0095605Slightly white alabastrum(tetraploid) 26.305
CNS0095606Slightly white alabastrum(tetraploid) 39.295
CNS0095607Whole white alabastrum(tetraploid) 14.293
CNS0095608Whole white alabastrum(tetraploid) 23.271
CNS0095609Whole white alabastrum(tetraploid) 37.806
CNS0095610Silvery flower (tetraploid) 127.697
CNS0095611Silvery flower (tetraploid) 224.029
CNS0095612Silvery flower (tetraploid) 39.558
CNS0095613Golden flower (tetraploid) 117.254
CNS0095614Golden flower (tetraploid) 226.219
CNS0095615Golden flower (tetraploid) 317.266
CRA001975CRR073297Stem 15.921
CRR073298Stem 24.478
CRR073299Stem 34.801
CRR073300Leaf 16.147
CRR073301Leaf 25.003
CRR073302Leaf 32.996
CRR073303Juvenile bud 13.583
CRR073304Juvenile bud 26.310
CRR073305Juvenile bud 34.062
CRR073306Third green 13.115
CRR073307Third green 23.058
CRR073308Third green 32.937
CRR073309Second white 13.292
CRR073310Second white 24.989
CRR073311Second white 33.228
CRR073312Silver flowering 12.198
CRR073313Silver flowering 21.873
CRR073314Silver flowering 34.130
CRR073315Gold flowering 16.112
CRR073316Gold flowering 210.092
CRR073317Gold flowering 32.654
CRR073318Tawny withering 13.596
CRR073319Tawny withering 23.807
CRR073320Tawny withering 34.689