Detail information of GWHGAAZE031684


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010278998.12.23612E-96PREDICTED: ATP synthase subunit O, mitochondrial-like [Nelumbo nucifera]
COGYP_003817066.18E-11ATP synthase F1 subunit delta
Swissprottr|P22778|ATPO_IPOBA9E-91ATP synthase subunit O, mitochondrial (Precursor)
trEMBLtr|Q9SXX1|Q9SXX1_IPOBA2E-87F1-ATP synthase delta subunit {ECO:0000313|EMBL:BAA77508.1}
TAIR10AT5G13450.11E-46delta subunit of Mt ATP synthase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6315229563155783-
GWHAAZE00000009mRNA6315229563155783-
GWHAAZE00000009exon6315229563152498-
GWHAAZE00000009exon6315258963152628-
GWHAAZE00000009exon6315371663153825-
GWHAAZE00000009exon6315420463154251-
GWHAAZE00000009exon6315457263154684-
GWHAAZE00000009exon6315547763155783-
GWHAAZE00000009CDS6315547763155783-
GWHAAZE00000009CDS6315457263154684-
GWHAAZE00000009CDS6315420463154251-
GWHAAZE00000009CDS6315371663153825-
GWHAAZE00000009CDS6315258963152628-
GWHAAZE00000009CDS6315229563152498-
Transcript Sequence

Network for GWHGAAZE031684

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0160


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00213.19OSCP291408.20E-22
PF00213.19OSCP2292625.80E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02137ATPeF0O, ATP5O, ATP5 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0015986biological_processATP synthesis coupled proton transport
GO:0046933molecular_functionproton-transporting ATP synthase activity, rotational mechanism

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf137.042
SRR3591706second leaf56.007
SRR3591707mature leaf31.296
SRR3591708Shoot apex92.284
SRR3591709Stem87.731
SRR3591710White floral bud158.461
SRR3591711White flower165.324
SRR3591712Green floral bud162.496
SRR3591713Yellow flower156.274
SRP173429 SRR8316895Juvenile bud stage 77.083
SRR8316896Juvenile bud stage 119.927
SRR8316897Juvenile bud stage 67.588
SRR8316894Third green stage 58.278
SRR8316900Third green stage 195.688
SRR8316901Third green stage 192.576
SRR8316898Complete white stage 97.142
SRR8316899Complete white stage 160.072
SRR8316903Complete white stage 135.415
SRR8316902Silver flowering stage118.242
SRR8316904Silver flowering stage149.755
SRR8316905Silver flowering stage86.142
SRR8316906Gold flowering stage 273.366
SRR8316907Gold flowering stage 287.319
SRR8316908Gold flowering stage 301.412
SRP132670SRR6706286Control159.989
SRR6706287Light intensity 50%169.811
SRR6706288Light intensity 20%169.870
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1134.375
CNS0095593Slightly white alabastrum(diploid) 2144.383
CNS0095594Slightly white alabastrum(diploid) 3134.066
CNS0095595Whole white alabastrum(diploid) 2129.056
CNS0095596Whole white alabastrum(diploid) 3158.844
CNS0095597Whole white alabastrum(diploid) 4118.445
CNS0095598Silvery flower (diploied) 186.876
CNS0095599Silvery flower (diploied) 292.158
CNS0095600Silvery flower (diploied) 3161.201
CNS0095601Golden flower (diploid) 199.803
CNS0095602Golden flower (diploid) 2122.488
CNS0095603Golden flower (diploid) 3118.600
CNS0095604Slightly white alabastrum(tetraploid) 1153.526
CNS0095605Slightly white alabastrum(tetraploid) 2135.182
CNS0095606Slightly white alabastrum(tetraploid) 3162.782
CNS0095607Whole white alabastrum(tetraploid) 1120.633
CNS0095608Whole white alabastrum(tetraploid) 2139.495
CNS0095609Whole white alabastrum(tetraploid) 3174.886
CNS0095610Silvery flower (tetraploid) 1188.600
CNS0095611Silvery flower (tetraploid) 2157.655
CNS0095612Silvery flower (tetraploid) 3239.856
CNS0095613Golden flower (tetraploid) 1174.505
CNS0095614Golden flower (tetraploid) 2183.184
CNS0095615Golden flower (tetraploid) 3165.270
CRA001975CRR073297Stem 1172.528
CRR073298Stem 2162.062
CRR073299Stem 3186.853
CRR073300Leaf 1211.492
CRR073301Leaf 2207.696
CRR073302Leaf 3244.373
CRR073303Juvenile bud 1276.843
CRR073304Juvenile bud 2301.565
CRR073305Juvenile bud 3266.776
CRR073306Third green 1349.912
CRR073307Third green 2330.064
CRR073308Third green 3305.801
CRR073309Second white 1439.065
CRR073310Second white 2343.487
CRR073311Second white 3287.318
CRR073312Silver flowering 1290.067
CRR073313Silver flowering 2241.994
CRR073314Silver flowering 3224.797
CRR073315Gold flowering 177.900
CRR073316Gold flowering 2102.160
CRR073317Gold flowering 380.428
CRR073318Tawny withering 1142.437
CRR073319Tawny withering 2146.375
CRR073320Tawny withering 3157.510