Detail information of GWHGAAZE031728


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010279505.18.15725E-93PREDICTED: N-terminal acetyltransferase A complex catalytic subunit ard1-like [Nelumbo nucifera]
COGYP_004781726.12E-23ribosomal-protein-alanine acetyltransferase
trEMBLtr|A0A068V8V0|A0A068V8V0_COFCA3E-91Coffea canephora DH200=94 genomic scaffold, scaffold_122 {ECO:0000313|EMBL:CDP16348.1}
TAIR10AT5G13780.12E-68Acyl-CoA N-acyltransferases (NAT) superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6412378164125704-
GWHAAZE00000009mRNA6412378164125704-
GWHAAZE00000009exon6412378164124044-
GWHAAZE00000009exon6412548964125704-
GWHAAZE00000009CDS6412548964125704-
GWHAAZE00000009CDS6412378164124044-
Transcript Sequence

Network for GWHGAAZE031728

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00583.26Acetyltransf_1141008.90E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008080molecular_functionN-acetyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf64.725
SRR3591706second leaf49.258
SRR3591707mature leaf58.570
SRR3591708Shoot apex53.960
SRR3591709Stem53.187
SRR3591710White floral bud84.311
SRR3591711White flower89.459
SRR3591712Green floral bud80.529
SRR3591713Yellow flower78.965
SRP173429 SRR8316895Juvenile bud stage 44.012
SRR8316896Juvenile bud stage 57.180
SRR8316897Juvenile bud stage 30.557
SRR8316894Third green stage 23.294
SRR8316900Third green stage 72.538
SRR8316901Third green stage 71.205
SRR8316898Complete white stage 34.229
SRR8316899Complete white stage 104.012
SRR8316903Complete white stage 52.147
SRR8316902Silver flowering stage33.221
SRR8316904Silver flowering stage34.698
SRR8316905Silver flowering stage17.898
SRR8316906Gold flowering stage 53.710
SRR8316907Gold flowering stage 58.445
SRR8316908Gold flowering stage 55.133
SRP132670SRR6706286Control122.777
SRR6706287Light intensity 50%116.164
SRR6706288Light intensity 20%116.850
CNP0000432CNS0095592Slightly white alabastrum(diploid) 177.361
CNS0095593Slightly white alabastrum(diploid) 271.629
CNS0095594Slightly white alabastrum(diploid) 372.670
CNS0095595Whole white alabastrum(diploid) 271.033
CNS0095596Whole white alabastrum(diploid) 354.607
CNS0095597Whole white alabastrum(diploid) 452.361
CNS0095598Silvery flower (diploied) 182.468
CNS0095599Silvery flower (diploied) 270.497
CNS0095600Silvery flower (diploied) 376.484
CNS0095601Golden flower (diploid) 164.013
CNS0095602Golden flower (diploid) 275.381
CNS0095603Golden flower (diploid) 374.710
CNS0095604Slightly white alabastrum(tetraploid) 170.175
CNS0095605Slightly white alabastrum(tetraploid) 272.708
CNS0095606Slightly white alabastrum(tetraploid) 380.668
CNS0095607Whole white alabastrum(tetraploid) 161.371
CNS0095608Whole white alabastrum(tetraploid) 253.575
CNS0095609Whole white alabastrum(tetraploid) 367.551
CNS0095610Silvery flower (tetraploid) 171.668
CNS0095611Silvery flower (tetraploid) 274.337
CNS0095612Silvery flower (tetraploid) 381.073
CNS0095613Golden flower (tetraploid) 159.869
CNS0095614Golden flower (tetraploid) 275.420
CNS0095615Golden flower (tetraploid) 362.648
CRA001975CRR073297Stem 171.730
CRR073298Stem 281.281
CRR073299Stem 3109.007
CRR073300Leaf 185.841
CRR073301Leaf 2105.962
CRR073302Leaf 3135.548
CRR073303Juvenile bud 1107.433
CRR073304Juvenile bud 2130.084
CRR073305Juvenile bud 386.063
CRR073306Third green 189.864
CRR073307Third green 2109.449
CRR073308Third green 387.687
CRR073309Second white 168.508
CRR073310Second white 269.322
CRR073311Second white 345.496
CRR073312Silver flowering 149.147
CRR073313Silver flowering 250.909
CRR073314Silver flowering 348.944
CRR073315Gold flowering 158.749
CRR073316Gold flowering 260.505
CRR073317Gold flowering 352.401
CRR073318Tawny withering 177.543
CRR073319Tawny withering 280.624
CRR073320Tawny withering 369.886