Detail information of GWHGAAZE031730


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU42987.13.71211E-20hypothetical protein MIMGU_mgv1a006741mg [Erythranthe guttata]
Swissprottr|Q9SV01|FBW4_ARATH4E-10F-box/WD-40 repeat-containing protein At3g52030
trEMBLtr|A0A022RR62|A0A022RR62_ERYGU1E-20Uncharacterized protein {ECO:0000313|EMBL:EYU42987.1}
TAIR10AT3G52030.20.000000003F-box family protein with WD40/YVTN repeat doamin

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6414354064145304-
GWHAAZE00000009mRNA6414354064145304-
GWHAAZE00000009exon6414354064143705-
GWHAAZE00000009exon6414395864144107-
GWHAAZE00000009exon6414515364145304-
GWHAAZE00000009CDS6414515364145304-
GWHAAZE00000009CDS6414395864144107-
GWHAAZE00000009CDS6414354064143705-
Transcript Sequence

Network for GWHGAAZE031730

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box21621.10E-07
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.454
SRR3591706second leaf2.088
SRR3591707mature leaf2.822
SRR3591708Shoot apex7.236
SRR3591709Stem6.132
SRR3591710White floral bud3.427
SRR3591711White flower3.486
SRR3591712Green floral bud3.209
SRR3591713Yellow flower2.386
SRP173429 SRR8316895Juvenile bud stage 3.621
SRR8316896Juvenile bud stage 5.802
SRR8316897Juvenile bud stage 1.913
SRR8316894Third green stage 1.498
SRR8316900Third green stage 3.373
SRR8316901Third green stage 5.903
SRR8316898Complete white stage 1.569
SRR8316899Complete white stage 6.805
SRR8316903Complete white stage 2.586
SRR8316902Silver flowering stage1.563
SRR8316904Silver flowering stage3.012
SRR8316905Silver flowering stage1.039
SRR8316906Gold flowering stage 5.230
SRR8316907Gold flowering stage 2.524
SRR8316908Gold flowering stage 4.634
SRP132670SRR6706286Control4.058
SRR6706287Light intensity 50%3.179
SRR6706288Light intensity 20%2.811
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.796
CNS0095593Slightly white alabastrum(diploid) 22.654
CNS0095594Slightly white alabastrum(diploid) 31.458
CNS0095595Whole white alabastrum(diploid) 22.393
CNS0095596Whole white alabastrum(diploid) 33.281
CNS0095597Whole white alabastrum(diploid) 43.290
CNS0095598Silvery flower (diploied) 12.353
CNS0095599Silvery flower (diploied) 22.981
CNS0095600Silvery flower (diploied) 35.348
CNS0095601Golden flower (diploid) 13.077
CNS0095602Golden flower (diploid) 25.315
CNS0095603Golden flower (diploid) 33.014
CNS0095604Slightly white alabastrum(tetraploid) 13.877
CNS0095605Slightly white alabastrum(tetraploid) 22.323
CNS0095606Slightly white alabastrum(tetraploid) 39.515
CNS0095607Whole white alabastrum(tetraploid) 11.967
CNS0095608Whole white alabastrum(tetraploid) 21.900
CNS0095609Whole white alabastrum(tetraploid) 34.840
CNS0095610Silvery flower (tetraploid) 15.058
CNS0095611Silvery flower (tetraploid) 25.128
CNS0095612Silvery flower (tetraploid) 34.975
CNS0095613Golden flower (tetraploid) 11.658
CNS0095614Golden flower (tetraploid) 22.920
CNS0095615Golden flower (tetraploid) 33.134
CRA001975CRR073297Stem 13.768
CRR073298Stem 24.816
CRR073299Stem 34.381
CRR073300Leaf 15.450
CRR073301Leaf 23.784
CRR073302Leaf 33.195
CRR073303Juvenile bud 13.924
CRR073304Juvenile bud 24.784
CRR073305Juvenile bud 33.246
CRR073306Third green 11.072
CRR073307Third green 21.122
CRR073308Third green 30.784
CRR073309Second white 11.958
CRR073310Second white 20.731
CRR073311Second white 30.971
CRR073312Silver flowering 12.090
CRR073313Silver flowering 20.733
CRR073314Silver flowering 31.705
CRR073315Gold flowering 11.017
CRR073316Gold flowering 21.589
CRR073317Gold flowering 30.742
CRR073318Tawny withering 13.571
CRR073319Tawny withering 21.218
CRR073320Tawny withering 32.919