Detail information of GWHGAAZE031741


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG05002.11.0748E-142V-type proton ATPase subunit D -like protein [Gossypium arboreum]
COGYP_004577184.17E-23V-type ATP synthase subunit D
Swissprottr|Q9XGM1|VATD_ARATH3E-130V-type proton ATPase subunit D
trEMBLtr|A0A061DJY4|A0A061DJY4_THECC1E-142ATP synthase subunit d, putative isoform 1 {ECO:0000313|EMBL:EOX92950.1}
TAIR10AT3G58730.11E-103vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6433720964337992+
GWHAAZE00000009mRNA6433720964337992+
GWHAAZE00000009exon6433720964337440+
GWHAAZE00000009exon6433752064337992+
GWHAAZE00000009CDS6433720964337440+
GWHAAZE00000009CDS6433752064337992+
Transcript Sequence

Network for GWHGAAZE031741

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01813.18ATP-synt_D19779.90E-15
PF01813.18ATP-synt_D751813.30E-41
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02149ATPeV1D, ATP6M Metabolic pathways map01100
Oxidative phosphorylationmap00190
mTOR signaling pathwaymap04150
Phagosomemap04145
Collecting duct acid secretionmap04966
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:0042626molecular_functionATPase-coupled transmembrane transporter activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf183.807
SRR3591706second leaf164.482
SRR3591707mature leaf108.048
SRR3591708Shoot apex168.584
SRR3591709Stem116.757
SRR3591710White floral bud165.845
SRR3591711White flower155.643
SRR3591712Green floral bud248.448
SRR3591713Yellow flower125.041
SRP173429 SRR8316895Juvenile bud stage 104.633
SRR8316896Juvenile bud stage 131.113
SRR8316897Juvenile bud stage 73.355
SRR8316894Third green stage 66.812
SRR8316900Third green stage 272.874
SRR8316901Third green stage 252.875
SRR8316898Complete white stage 118.393
SRR8316899Complete white stage 243.805
SRR8316903Complete white stage 130.127
SRR8316902Silver flowering stage93.214
SRR8316904Silver flowering stage109.109
SRR8316905Silver flowering stage64.278
SRR8316906Gold flowering stage 196.124
SRR8316907Gold flowering stage 188.436
SRR8316908Gold flowering stage 197.132
SRP132670SRR6706286Control319.503
SRR6706287Light intensity 50%353.300
SRR6706288Light intensity 20%384.567
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1157.307
CNS0095593Slightly white alabastrum(diploid) 2186.692
CNS0095594Slightly white alabastrum(diploid) 3137.783
CNS0095595Whole white alabastrum(diploid) 2176.651
CNS0095596Whole white alabastrum(diploid) 3197.385
CNS0095597Whole white alabastrum(diploid) 4141.828
CNS0095598Silvery flower (diploied) 1105.913
CNS0095599Silvery flower (diploied) 2119.771
CNS0095600Silvery flower (diploied) 3181.334
CNS0095601Golden flower (diploid) 192.432
CNS0095602Golden flower (diploid) 2167.937
CNS0095603Golden flower (diploid) 3161.599
CNS0095604Slightly white alabastrum(tetraploid) 1201.891
CNS0095605Slightly white alabastrum(tetraploid) 2190.719
CNS0095606Slightly white alabastrum(tetraploid) 3273.666
CNS0095607Whole white alabastrum(tetraploid) 1155.393
CNS0095608Whole white alabastrum(tetraploid) 2154.472
CNS0095609Whole white alabastrum(tetraploid) 3263.726
CNS0095610Silvery flower (tetraploid) 1174.255
CNS0095611Silvery flower (tetraploid) 2155.590
CNS0095612Silvery flower (tetraploid) 3166.709
CNS0095613Golden flower (tetraploid) 1143.310
CNS0095614Golden flower (tetraploid) 2176.950
CNS0095615Golden flower (tetraploid) 3126.143
CRA001975CRR073297Stem 1253.348
CRR073298Stem 2260.831
CRR073299Stem 3318.939
CRR073300Leaf 1342.860
CRR073301Leaf 2350.148
CRR073302Leaf 3528.060
CRR073303Juvenile bud 1472.644
CRR073304Juvenile bud 2553.052
CRR073305Juvenile bud 3346.604
CRR073306Third green 1373.031
CRR073307Third green 2330.576
CRR073308Third green 3312.371
CRR073309Second white 1274.702
CRR073310Second white 2218.848
CRR073311Second white 3156.901
CRR073312Silver flowering 1200.403
CRR073313Silver flowering 2242.180
CRR073314Silver flowering 3179.476
CRR073315Gold flowering 1246.577
CRR073316Gold flowering 2263.465
CRR073317Gold flowering 3201.058
CRR073318Tawny withering 1232.317
CRR073319Tawny withering 2161.127
CRR073320Tawny withering 3252.535