Detail information of GWHGAAZE031771


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010062092.10PREDICTED: uncharacterized protein LOC104449582 [Eucalyptus grandis]
trEMBLtr|A0A059BU30|A0A059BU30_EUCGR0Uncharacterized protein {ECO:0000313|EMBL:KCW69155.1}
TAIR10AT2G44020.10Mitochondrial transcription termination factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6466423464665562-
GWHAAZE00000009mRNA6466423464665562-
GWHAAZE00000009exon6466423464665562-
GWHAAZE00000009CDS6466423464665562-
Transcript Sequence

Network for GWHGAAZE031771

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02536.15mTERF843924.20E-106
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilymTERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003690molecular_functiondouble-stranded DNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf6.135
SRR3591706second leaf5.527
SRR3591707mature leaf5.362
SRR3591708Shoot apex8.966
SRR3591709Stem6.062
SRR3591710White floral bud6.627
SRR3591711White flower9.075
SRR3591712Green floral bud12.115
SRR3591713Yellow flower6.802
SRP173429 SRR8316895Juvenile bud stage 8.631
SRR8316896Juvenile bud stage 13.389
SRR8316897Juvenile bud stage 6.729
SRR8316894Third green stage 4.958
SRR8316900Third green stage 14.766
SRR8316901Third green stage 13.106
SRR8316898Complete white stage 2.887
SRR8316899Complete white stage 17.119
SRR8316903Complete white stage 4.972
SRR8316902Silver flowering stage3.679
SRR8316904Silver flowering stage7.251
SRR8316905Silver flowering stage2.496
SRR8316906Gold flowering stage 9.320
SRR8316907Gold flowering stage 8.072
SRR8316908Gold flowering stage 7.835
SRP132670SRR6706286Control6.474
SRR6706287Light intensity 50%7.727
SRR6706288Light intensity 20%9.201
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.364
CNS0095593Slightly white alabastrum(diploid) 211.141
CNS0095594Slightly white alabastrum(diploid) 311.397
CNS0095595Whole white alabastrum(diploid) 29.070
CNS0095596Whole white alabastrum(diploid) 37.565
CNS0095597Whole white alabastrum(diploid) 45.008
CNS0095598Silvery flower (diploied) 16.675
CNS0095599Silvery flower (diploied) 26.401
CNS0095600Silvery flower (diploied) 37.552
CNS0095601Golden flower (diploid) 15.118
CNS0095602Golden flower (diploid) 28.420
CNS0095603Golden flower (diploid) 37.800
CNS0095604Slightly white alabastrum(tetraploid) 19.850
CNS0095605Slightly white alabastrum(tetraploid) 27.426
CNS0095606Slightly white alabastrum(tetraploid) 312.601
CNS0095607Whole white alabastrum(tetraploid) 15.578
CNS0095608Whole white alabastrum(tetraploid) 25.768
CNS0095609Whole white alabastrum(tetraploid) 37.035
CNS0095610Silvery flower (tetraploid) 16.304
CNS0095611Silvery flower (tetraploid) 27.559
CNS0095612Silvery flower (tetraploid) 39.874
CNS0095613Golden flower (tetraploid) 15.933
CNS0095614Golden flower (tetraploid) 28.264
CNS0095615Golden flower (tetraploid) 35.127
CRA001975CRR073297Stem 114.147
CRR073298Stem 213.403
CRR073299Stem 313.939
CRR073300Leaf 113.633
CRR073301Leaf 212.950
CRR073302Leaf 39.626
CRR073303Juvenile bud 117.143
CRR073304Juvenile bud 29.636
CRR073305Juvenile bud 314.338
CRR073306Third green 17.078
CRR073307Third green 23.637
CRR073308Third green 37.801
CRR073309Second white 16.467
CRR073310Second white 25.090
CRR073311Second white 36.762
CRR073312Silver flowering 15.310
CRR073313Silver flowering 25.689
CRR073314Silver flowering 34.428
CRR073315Gold flowering 18.349
CRR073316Gold flowering 210.740
CRR073317Gold flowering 36.402
CRR073318Tawny withering 19.796
CRR073319Tawny withering 27.676
CRR073320Tawny withering 38.794