Gene detail

Detail information of GWHGAAZE031786

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010659055.1	9.9235E-169	PREDICTED: 11-oxo-beta-amyrin 30-oxidase isoform X2 [Vitis vinifera]
COG	YP_004674946.1	2E-16	cytochrome P450
Swissprot	tr\|B9X287\|C7346_ORYSJ	3E-23	Cytochrome P450 734A6
trEMBL	tr\|F6HVA0\|F6HVA0_VITVI	1E-168	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB58612.1}
TAIR10	AT3G61880.1	4E-21	cytochrome p450 78a9

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	64841469	64849666	+
GWHAAZE00000009	mRNA	64841469	64849666	+
GWHAAZE00000009	exon	64841469	64842053	+
GWHAAZE00000009	exon	64843065	64843215	+
GWHAAZE00000009	exon	64846019	64846186	+
GWHAAZE00000009	exon	64846521	64846621	+
GWHAAZE00000009	exon	64849097	64849666	+
GWHAAZE00000009	CDS	64841469	64842053	+
GWHAAZE00000009	CDS	64843065	64843215	+
GWHAAZE00000009	CDS	64846019	64846186	+
GWHAAZE00000009	CDS	64846521	64846621	+
GWHAAZE00000009	CDS	64849097	64849204	+
GWHAAZE00000009	three_prime_UTR	64849205	64849666	+

Transcript Sequence
>GWHTAAZE031824 ATGTATGTATTTCTTCATTATTCACAGGTTGAGAAGAGAAGAAACTCGTTGGAAATTGCGCTAAATGGCAAATTGCTTGAGAGAGCAAATGTGGTTCCCACCAAAATTGTGGACTGTTTTATGGAACGAATACAGAATATAGTGGCCAAAGGAGGTCTAGACTGTGAAGTGGTTTCTCAACACTTGGCTTTTTCCATGTTGGGAGCTACACTTTTCGGTGATGTGTTTTTGGCTTGGTCTGAGGCAACTTTTTACGAAGAGCTTTTAATGAGGATTGCCAAGGATGCTTGCTTTTGGGCTTCATATAGTATTATTCCCTTCTGGCAACTGGGATTTTGGAAGTATCATAATTTATGTGCAAAGTTGAAATTCTTAACTCAAGACATTATTAAACAGTGCAGATATTATTCGAGTGATGTGAGTGCAAATAGCTCATTCTTATCCGGGTTTGATGACCATCTCAGTACAAGTGAAGAACCATGTGGAAATATCATAAGTTTGATGTTTCATGGTTCTCTAACTACTGCGGGTCTGATTGGTAATATCTTGGCAAGGCTTGTGAAGCATCCGGATACACAGGAGAAGATTCACTCTGAGATAATGATGGTGCATAAGGTTTCAGAGGAACATGGTCAAAAAGATGTTAATAAGATGCCGTTTTTATTGGCAACTGTGTATGAGTGTGCTCGTCTTCTTCCTGCCGGGCCTTTGCTGCAAAGATGTTCTCTCAAACACGACTTAGATCTTCAATCTGGTGTAAAAGTACCAGCTGGAGCAATACTTGTTGTGCCGGTTCAGTTGGTACAGACGGATGATTCTTGTTGGGGGAAGGATGCTAGCCAGTTTAATCCATATCGTTTCCTGTCAAAGGGGGGAAAGATATCTGATTGTGATCATTTACCAGCATTTCTTCCATTTGGATCTGGTGCACGATCCTGTATTGGCCAGAAACTAGCAATCCTTGGAGTTGCCACATTATTTGCATCTTTGCTCGAACACTACAAGGTACAGCTTCAGCCAGGATCCGAGAGTGACCCAAAACCAACGATGAACAATTGCATATTTCAGCTTCTTCCCAGTCCCAAGATAGTTTTTGAGAAGAGGAACAGCTGAATGAAAAAGTAAAGTGAAGGAGCACAAAAAAGGCCTTCTATCTGGATACATATATATAGTCACATGTCCATATTTGGTGGAAAAGACACCACTCTTTTTCCCTTTTTTTGTTTCTCTCATCTAGAAATAATAGGGAGGTGCATTTTTGAGGCTCTGCAGCAGTGAAATAGGAGGATAGAGAGTACATGAGTATGTTTTTACCAGCTCATGTTTTTTCTCTCATCCTTTTATGGCTCAGGTGCTGTGTTGTATATTGCACATGATGAAAGTTGTAAATTGTTTTTCAAGCACTGGGCTGGGCTGGGCTGTTGCAGTGGAGGACCCCTCTGGTTTTTCTCCCCAAAGACTTGCAGTGATATGGTTCTTTTTTTTTCTCCAAATGAAGTTGGTTGTAACTTGTACTTCCTTAAATGAGAGTGGATGTTTTGTAGTTAGATTGTCGTGATGTGATTGTGTGGTGAT

Network for GWHGAAZE031786

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	13	358	3.30E-48

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	19.818
	SRR3591706	second leaf	23.072
	SRR3591707	mature leaf	22.648
	SRR3591708	Shoot apex	21.415
	SRR3591709	Stem	21.446
	SRR3591710	White floral bud	15.491
	SRR3591711	White flower	19.238
	SRR3591712	Green floral bud	16.329
	SRR3591713	Yellow flower	15.025
SRP173429	SRR8316895	Juvenile bud stage	9.351
	SRR8316896	Juvenile bud stage	13.192
	SRR8316897	Juvenile bud stage	4.125
	SRR8316894	Third green stage	8.809
	SRR8316900	Third green stage	30.154
	SRR8316901	Third green stage	23.761
	SRR8316898	Complete white stage	8.963
	SRR8316899	Complete white stage	43.674
	SRR8316903	Complete white stage	16.192
	SRR8316902	Silver flowering stage	5.444
	SRR8316904	Silver flowering stage	8.885
	SRR8316905	Silver flowering stage	2.838
	SRR8316906	Gold flowering stage	11.683
	SRR8316907	Gold flowering stage	11.250
	SRR8316908	Gold flowering stage	14.697
SRP132670	SRR6706286	Control	12.748
	SRR6706287	Light intensity 50%	10.199
	SRR6706288	Light intensity 20%	12.601
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.406
	CNS0095593	Slightly white alabastrum(diploid) 2	12.478
	CNS0095594	Slightly white alabastrum(diploid) 3	11.282
	CNS0095595	Whole white alabastrum(diploid) 2	12.091
	CNS0095596	Whole white alabastrum(diploid) 3	12.509
	CNS0095597	Whole white alabastrum(diploid) 4	12.581
	CNS0095598	Silvery flower (diploied) 1	12.500
	CNS0095599	Silvery flower (diploied) 2	11.048
	CNS0095600	Silvery flower (diploied) 3	18.251
	CNS0095601	Golden flower (diploid) 1	11.515
	CNS0095602	Golden flower (diploid) 2	19.257
	CNS0095603	Golden flower (diploid) 3	17.959
	CNS0095604	Slightly white alabastrum(tetraploid) 1	18.520
	CNS0095605	Slightly white alabastrum(tetraploid) 2	15.235
	CNS0095606	Slightly white alabastrum(tetraploid) 3	38.721
	CNS0095607	Whole white alabastrum(tetraploid) 1	17.495
	CNS0095608	Whole white alabastrum(tetraploid) 2	13.448
	CNS0095609	Whole white alabastrum(tetraploid) 3	25.208
	CNS0095610	Silvery flower (tetraploid) 1	17.313
	CNS0095611	Silvery flower (tetraploid) 2	21.267
	CNS0095612	Silvery flower (tetraploid) 3	10.464
	CNS0095613	Golden flower (tetraploid) 1	6.382
	CNS0095614	Golden flower (tetraploid) 2	13.593
	CNS0095615	Golden flower (tetraploid) 3	4.615
CRA001975	CRR073297	Stem 1	21.556
	CRR073298	Stem 2	17.367
	CRR073299	Stem 3	20.468
	CRR073300	Leaf 1	22.871
	CRR073301	Leaf 2	18.118
	CRR073302	Leaf 3	22.277
	CRR073303	Juvenile bud 1	30.089
	CRR073304	Juvenile bud 2	22.859
	CRR073305	Juvenile bud 3	37.288
	CRR073306	Third green 1	6.467
	CRR073307	Third green 2	4.939
	CRR073308	Third green 3	5.724
	CRR073309	Second white 1	5.066
	CRR073310	Second white 2	6.031
	CRR073311	Second white 3	3.554
	CRR073312	Silver flowering 1	4.052
	CRR073313	Silver flowering 2	4.199
	CRR073314	Silver flowering 3	2.838
	CRR073315	Gold flowering 1	15.730
	CRR073316	Gold flowering 2	14.763
	CRR073317	Gold flowering 3	11.919
	CRR073318	Tawny withering 1	30.482
	CRR073319	Tawny withering 2	16.168
	CRR073320	Tawny withering 3	24.764