Detail information of GWHGAAZE031800


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010106126.13.39475E-95Nascent polypeptide-associated complex subunit alpha-like protein [Morus notabilis]
Swissprottr|Q9M612|NACA_PINTA6E-86Nascent polypeptide-associated complex subunit alpha-like protein
trEMBLtr|W9S3Y1|W9S3Y1_9ROSA1E-95Nascent polypeptide-associated complex subunit alpha-like protein {ECO:0000313|EMBL:EXC07786.1}
TAIR10AT3G12390.11E-52Nascent polypeptide-associated complex (NAC), alpha subunit family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6505147065052842-
GWHAAZE00000009mRNA6505147065052842-
GWHAAZE00000009exon6505147065051802-
GWHAAZE00000009exon6505269365052842-
GWHAAZE00000009CDS6505269365052842-
GWHAAZE00000009CDS6505147065051802-
Transcript Sequence

Network for GWHGAAZE031800

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01849.19NAC22774.00E-23
PF19026.1HYPK_UBA1201594.20E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03626EGD2, NACA Parathyroid hormone synthesis, secretion and action map04928

Gene Ontology

GO term OntologyName
GO:0005854cellular_componentnascent polypeptide-associated complex

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.685
SRR3591706second leaf0.841
SRR3591707mature leaf0.622
SRR3591708Shoot apex1.779
SRR3591709Stem3.250
SRR3591710White floral bud1.522
SRR3591711White flower0.000
SRR3591712Green floral bud4.608
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 10.924
SRR8316896Juvenile bud stage 14.737
SRR8316897Juvenile bud stage 6.390
SRR8316894Third green stage 2.445
SRR8316900Third green stage 13.234
SRR8316901Third green stage 9.079
SRR8316898Complete white stage 1.479
SRR8316899Complete white stage 6.524
SRR8316903Complete white stage 2.854
SRR8316902Silver flowering stage0.649
SRR8316904Silver flowering stage0.940
SRR8316905Silver flowering stage0.383
SRR8316906Gold flowering stage 0.779
SRR8316907Gold flowering stage 0.653
SRR8316908Gold flowering stage 1.099
SRP132670SRR6706286Control8.455
SRR6706287Light intensity 50%8.346
SRR6706288Light intensity 20%7.214
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.886
CNS0095593Slightly white alabastrum(diploid) 214.548
CNS0095594Slightly white alabastrum(diploid) 39.318
CNS0095595Whole white alabastrum(diploid) 29.999
CNS0095596Whole white alabastrum(diploid) 313.061
CNS0095597Whole white alabastrum(diploid) 48.335
CNS0095598Silvery flower (diploied) 19.974
CNS0095599Silvery flower (diploied) 211.407
CNS0095600Silvery flower (diploied) 33.081
CNS0095601Golden flower (diploid) 19.689
CNS0095602Golden flower (diploid) 23.986
CNS0095603Golden flower (diploid) 33.267
CNS0095604Slightly white alabastrum(tetraploid) 18.540
CNS0095605Slightly white alabastrum(tetraploid) 211.001
CNS0095606Slightly white alabastrum(tetraploid) 39.713
CNS0095607Whole white alabastrum(tetraploid) 15.817
CNS0095608Whole white alabastrum(tetraploid) 25.022
CNS0095609Whole white alabastrum(tetraploid) 37.274
CNS0095610Silvery flower (tetraploid) 10.360
CNS0095611Silvery flower (tetraploid) 22.050
CNS0095612Silvery flower (tetraploid) 31.890
CNS0095613Golden flower (tetraploid) 11.227
CNS0095614Golden flower (tetraploid) 20.535
CNS0095615Golden flower (tetraploid) 30.226
CRA001975CRR073297Stem 123.724
CRR073298Stem 224.316
CRR073299Stem 323.480
CRR073300Leaf 110.010
CRR073301Leaf 210.935
CRR073302Leaf 39.939
CRR073303Juvenile bud 18.998
CRR073304Juvenile bud 24.305
CRR073305Juvenile bud 36.734
CRR073306Third green 11.705
CRR073307Third green 22.235
CRR073308Third green 30.763
CRR073309Second white 10.126
CRR073310Second white 20.346
CRR073311Second white 30.486
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.632
CRR073314Silver flowering 30.532
CRR073315Gold flowering 125.371
CRR073316Gold flowering 232.245
CRR073317Gold flowering 320.807
CRR073318Tawny withering 114.064
CRR073319Tawny withering 214.878
CRR073320Tawny withering 320.864