Detail information of GWHGAAZE031836


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP40550.16.74615E-70hypothetical protein JCGZ_24549 [Jatropha curcas]
Swissprottr|Q9FY48|KEG_ARATH1E-65E3 ubiquitin-protein ligase KEG
trEMBLtr|A0A067L7R5|A0A067L7R5_JATCU3E-70Uncharacterized protein {ECO:0000313|EMBL:KDP40550.1}
TAIR10AT5G13530.29E-35protein kinases;ubiquitin-protein ligases

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6567855965679966+
GWHAAZE00000009mRNA6567855965679966+
GWHAAZE00000009exon6567855965678700+
GWHAAZE00000009exon6567884365678895+
GWHAAZE00000009exon6567945265679801+
GWHAAZE00000009exon6567992765679966+
GWHAAZE00000009CDS6567855965678700+
GWHAAZE00000009CDS6567884365678895+
GWHAAZE00000009CDS6567945265679801+
GWHAAZE00000009CDS6567992765679966+
Transcript Sequence

Network for GWHGAAZE031836

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13445.7zf-RING_UBOX9395.50E-06
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.406
SRR3591706second leaf7.978
SRR3591707mature leaf7.359
SRR3591708Shoot apex8.731
SRR3591709Stem9.327
SRR3591710White floral bud19.597
SRR3591711White flower15.493
SRR3591712Green floral bud10.207
SRR3591713Yellow flower11.225
SRP173429 SRR8316895Juvenile bud stage 6.242
SRR8316896Juvenile bud stage 9.148
SRR8316897Juvenile bud stage 2.859
SRR8316894Third green stage 6.278
SRR8316900Third green stage 10.329
SRR8316901Third green stage 8.104
SRR8316898Complete white stage 3.094
SRR8316899Complete white stage 10.911
SRR8316903Complete white stage 12.305
SRR8316902Silver flowering stage5.843
SRR8316904Silver flowering stage12.484
SRR8316905Silver flowering stage6.587
SRR8316906Gold flowering stage 19.366
SRR8316907Gold flowering stage 19.109
SRR8316908Gold flowering stage 19.575
SRP132670SRR6706286Control17.831
SRR6706287Light intensity 50%19.318
SRR6706288Light intensity 20%18.567
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.851
CNS0095593Slightly white alabastrum(diploid) 21.096
CNS0095594Slightly white alabastrum(diploid) 32.417
CNS0095595Whole white alabastrum(diploid) 22.516
CNS0095596Whole white alabastrum(diploid) 32.396
CNS0095597Whole white alabastrum(diploid) 43.675
CNS0095598Silvery flower (diploied) 15.241
CNS0095599Silvery flower (diploied) 25.929
CNS0095600Silvery flower (diploied) 322.875
CNS0095601Golden flower (diploid) 16.859
CNS0095602Golden flower (diploid) 225.168
CNS0095603Golden flower (diploid) 324.483
CNS0095604Slightly white alabastrum(tetraploid) 15.063
CNS0095605Slightly white alabastrum(tetraploid) 23.346
CNS0095606Slightly white alabastrum(tetraploid) 315.224
CNS0095607Whole white alabastrum(tetraploid) 15.450
CNS0095608Whole white alabastrum(tetraploid) 22.996
CNS0095609Whole white alabastrum(tetraploid) 313.054
CNS0095610Silvery flower (tetraploid) 123.804
CNS0095611Silvery flower (tetraploid) 228.270
CNS0095612Silvery flower (tetraploid) 326.659
CNS0095613Golden flower (tetraploid) 17.308
CNS0095614Golden flower (tetraploid) 214.563
CNS0095615Golden flower (tetraploid) 325.640
CRA001975CRR073297Stem 117.306
CRR073298Stem 216.953
CRR073299Stem 310.493
CRR073300Leaf 116.258
CRR073301Leaf 213.463
CRR073302Leaf 311.669
CRR073303Juvenile bud 111.347
CRR073304Juvenile bud 212.415
CRR073305Juvenile bud 317.002
CRR073306Third green 117.677
CRR073307Third green 29.012
CRR073308Third green 314.189
CRR073309Second white 112.506
CRR073310Second white 221.142
CRR073311Second white 331.263
CRR073312Silver flowering 116.623
CRR073313Silver flowering 218.103
CRR073314Silver flowering 311.840
CRR073315Gold flowering 14.191
CRR073316Gold flowering 26.670
CRR073317Gold flowering 35.795
CRR073318Tawny withering 16.295
CRR073319Tawny withering 24.373
CRR073320Tawny withering 35.951