Detail information of GWHGAAZE031859


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007010961.10Uncharacterized protein isoform 1 [Theobroma cacao]
trEMBLtr|A0A061FSV5|A0A061FSV5_THECC0Uncharacterized protein isoform 1 {ECO:0000313|EMBL:EOY19772.1}
TAIR10AT5G13500.34E-143Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6599791866005460-
GWHAAZE00000009mRNA6599791866005460-
GWHAAZE00000009exon6600503266005460-
GWHAAZE00000009exon6599975565999822-
GWHAAZE00000009exon6599948165999682-
GWHAAZE00000009exon6599899565999092-
GWHAAZE00000009exon6599883465998903-
GWHAAZE00000009exon6599864265998713-
GWHAAZE00000009exon6599791865998082-
GWHAAZE00000009CDS6600503266005460-
GWHAAZE00000009CDS6599975565999822-
GWHAAZE00000009CDS6599948165999682-
GWHAAZE00000009CDS6599899565999092-
GWHAAZE00000009CDS6599883465998903-
GWHAAZE00000009CDS6599864265998713-
GWHAAZE00000009CDS6599791865998082-
Transcript Sequence

Network for GWHGAAZE031859

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20782HPAT Other types of O-glycan biosynthesis map00514

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.797
SRR3591706second leaf5.861
SRR3591707mature leaf1.719
SRR3591708Shoot apex7.607
SRR3591709Stem11.139
SRR3591710White floral bud5.196
SRR3591711White flower2.922
SRR3591712Green floral bud7.327
SRR3591713Yellow flower2.904
SRP173429 SRR8316895Juvenile bud stage 5.955
SRR8316896Juvenile bud stage 9.052
SRR8316897Juvenile bud stage 4.052
SRR8316894Third green stage 3.549
SRR8316900Third green stage 9.417
SRR8316901Third green stage 9.399
SRR8316898Complete white stage 1.657
SRR8316899Complete white stage 5.856
SRR8316903Complete white stage 4.053
SRR8316902Silver flowering stage1.767
SRR8316904Silver flowering stage2.098
SRR8316905Silver flowering stage0.905
SRR8316906Gold flowering stage 3.766
SRR8316907Gold flowering stage 2.907
SRR8316908Gold flowering stage 3.070
SRP132670SRR6706286Control4.083
SRR6706287Light intensity 50%3.689
SRR6706288Light intensity 20%4.129
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.584
CNS0095593Slightly white alabastrum(diploid) 28.012
CNS0095594Slightly white alabastrum(diploid) 36.975
CNS0095595Whole white alabastrum(diploid) 29.824
CNS0095596Whole white alabastrum(diploid) 312.996
CNS0095597Whole white alabastrum(diploid) 411.471
CNS0095598Silvery flower (diploied) 13.931
CNS0095599Silvery flower (diploied) 24.924
CNS0095600Silvery flower (diploied) 34.801
CNS0095601Golden flower (diploid) 13.403
CNS0095602Golden flower (diploid) 25.948
CNS0095603Golden flower (diploid) 34.076
CNS0095604Slightly white alabastrum(tetraploid) 115.798
CNS0095605Slightly white alabastrum(tetraploid) 211.838
CNS0095606Slightly white alabastrum(tetraploid) 310.305
CNS0095607Whole white alabastrum(tetraploid) 112.565
CNS0095608Whole white alabastrum(tetraploid) 217.543
CNS0095609Whole white alabastrum(tetraploid) 314.138
CNS0095610Silvery flower (tetraploid) 16.966
CNS0095611Silvery flower (tetraploid) 26.860
CNS0095612Silvery flower (tetraploid) 37.886
CNS0095613Golden flower (tetraploid) 13.595
CNS0095614Golden flower (tetraploid) 24.774
CNS0095615Golden flower (tetraploid) 33.019
CRA001975CRR073297Stem 15.116
CRR073298Stem 24.567
CRR073299Stem 34.297
CRR073300Leaf 17.754
CRR073301Leaf 24.433
CRR073302Leaf 35.833
CRR073303Juvenile bud 15.448
CRR073304Juvenile bud 25.970
CRR073305Juvenile bud 33.931
CRR073306Third green 11.178
CRR073307Third green 21.200
CRR073308Third green 31.296
CRR073309Second white 12.957
CRR073310Second white 21.081
CRR073311Second white 31.840
CRR073312Silver flowering 12.465
CRR073313Silver flowering 22.355
CRR073314Silver flowering 32.337
CRR073315Gold flowering 11.760
CRR073316Gold flowering 20.759
CRR073317Gold flowering 30.784
CRR073318Tawny withering 14.125
CRR073319Tawny withering 24.737
CRR073320Tawny withering 33.884