Detail information of GWHGAAZE031868


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006432551.12.27267E-14hypothetical protein CICLE_v10000859mg [Citrus clementina]
Swissprottr|A0AAR7|CCAMK_LOTJA5E-14Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase
trEMBLtr|V4T8C1|V4T8C1_9ROSI8E-15Uncharacterized protein {ECO:0000313|EMBL:ESR45791.1}
TAIR10AT1G50700.10.000003calcium-dependent protein kinase 33

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6612519766125470+
GWHAAZE00000009mRNA6612519766125470+
GWHAAZE00000009exon6612519766125208+
GWHAAZE00000009exon6612527366125470+
GWHAAZE00000009CDS6612519766125208+
GWHAAZE00000009CDS6612527366125470+
Transcript Sequence

Network for GWHGAAZE031868

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.313
SRR3591706second leaf2.129
SRR3591707mature leaf2.948
SRR3591708Shoot apex2.761
SRR3591709Stem6.409
SRR3591710White floral bud4.134
SRR3591711White flower3.416
SRR3591712Green floral bud3.532
SRR3591713Yellow flower2.130
SRP173429 SRR8316895Juvenile bud stage 0.761
SRR8316896Juvenile bud stage 2.676
SRR8316897Juvenile bud stage 1.316
SRR8316894Third green stage 0.859
SRR8316900Third green stage 2.945
SRR8316901Third green stage 2.473
SRR8316898Complete white stage 0.880
SRR8316899Complete white stage 5.006
SRR8316903Complete white stage 3.729
SRR8316902Silver flowering stage1.413
SRR8316904Silver flowering stage2.050
SRR8316905Silver flowering stage0.198
SRR8316906Gold flowering stage 0.619
SRR8316907Gold flowering stage 1.094
SRR8316908Gold flowering stage 1.034
SRP132670SRR6706286Control1.790
SRR6706287Light intensity 50%2.708
SRR6706288Light intensity 20%1.782
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.150
CNS0095593Slightly white alabastrum(diploid) 21.922
CNS0095594Slightly white alabastrum(diploid) 32.119
CNS0095595Whole white alabastrum(diploid) 24.326
CNS0095596Whole white alabastrum(diploid) 34.867
CNS0095597Whole white alabastrum(diploid) 46.095
CNS0095598Silvery flower (diploied) 12.283
CNS0095599Silvery flower (diploied) 20.503
CNS0095600Silvery flower (diploied) 31.592
CNS0095601Golden flower (diploid) 11.415
CNS0095602Golden flower (diploid) 22.913
CNS0095603Golden flower (diploid) 32.285
CNS0095604Slightly white alabastrum(tetraploid) 18.325
CNS0095605Slightly white alabastrum(tetraploid) 27.506
CNS0095606Slightly white alabastrum(tetraploid) 32.647
CNS0095607Whole white alabastrum(tetraploid) 17.600
CNS0095608Whole white alabastrum(tetraploid) 29.164
CNS0095609Whole white alabastrum(tetraploid) 33.697
CNS0095610Silvery flower (tetraploid) 10.975
CNS0095611Silvery flower (tetraploid) 22.295
CNS0095612Silvery flower (tetraploid) 33.233
CNS0095613Golden flower (tetraploid) 12.060
CNS0095614Golden flower (tetraploid) 21.589
CNS0095615Golden flower (tetraploid) 31.597
CRA001975CRR073297Stem 11.451
CRR073298Stem 21.892
CRR073299Stem 30.964
CRR073300Leaf 11.668
CRR073301Leaf 22.483
CRR073302Leaf 31.006
CRR073303Juvenile bud 11.695
CRR073304Juvenile bud 20.714
CRR073305Juvenile bud 31.423
CRR073306Third green 10.980
CRR073307Third green 21.090
CRR073308Third green 30.350
CRR073309Second white 10.067
CRR073310Second white 20.000
CRR073311Second white 30.486
CRR073312Silver flowering 10.587
CRR073313Silver flowering 20.047
CRR073314Silver flowering 30.006
CRR073315Gold flowering 11.734
CRR073316Gold flowering 21.075
CRR073317Gold flowering 30.330
CRR073318Tawny withering 12.243
CRR073319Tawny withering 21.110
CRR073320Tawny withering 31.753