Detail information of GWHGAAZE031883


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007030614.14.854E-113Prenylyltransferase superfamily protein [Theobroma cacao]
trEMBLtr|A0A061F258|A0A061F258_THECC2E-113Prenylyltransferase superfamily protein {ECO:0000313|EMBL:EOY11116.1}
TAIR10AT3G04830.14E-72Protein prenylyltransferase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6653583866545382-
GWHAAZE00000009mRNA6653583866545382-
GWHAAZE00000009exon6653583866536011-
GWHAAZE00000009exon6653959266539673-
GWHAAZE00000009exon6653981866539877-
GWHAAZE00000009exon6653997266540057-
GWHAAZE00000009exon6654045066540544-
GWHAAZE00000009exon6654401966544067-
GWHAAZE00000009exon6654506866545382-
GWHAAZE00000009five_prime_UTR6654516166545382-
GWHAAZE00000009CDS6654506866545160-
GWHAAZE00000009CDS6654401966544067-
GWHAAZE00000009CDS6654045066540544-
GWHAAZE00000009CDS6653997266540057-
GWHAAZE00000009CDS6653981866539877-
GWHAAZE00000009CDS6653959266539673-
GWHAAZE00000009CDS6653583866536011-
Transcript Sequence

Network for GWHGAAZE031883

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0223


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13432.7TPR_16511113.90E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf40.788
SRR3591706second leaf18.666
SRR3591707mature leaf22.818
SRR3591708Shoot apex30.473
SRR3591709Stem36.433
SRR3591710White floral bud48.526
SRR3591711White flower61.922
SRR3591712Green floral bud43.274
SRR3591713Yellow flower60.028
SRP173429 SRR8316895Juvenile bud stage 26.172
SRR8316896Juvenile bud stage 35.786
SRR8316897Juvenile bud stage 21.290
SRR8316894Third green stage 16.186
SRR8316900Third green stage 59.732
SRR8316901Third green stage 54.874
SRR8316898Complete white stage 34.851
SRR8316899Complete white stage 65.280
SRR8316903Complete white stage 47.399
SRR8316902Silver flowering stage33.180
SRR8316904Silver flowering stage41.728
SRR8316905Silver flowering stage23.358
SRR8316906Gold flowering stage 81.326
SRR8316907Gold flowering stage 82.482
SRR8316908Gold flowering stage 81.797
SRP132670SRR6706286Control94.271
SRR6706287Light intensity 50%92.688
SRR6706288Light intensity 20%87.771
CNP0000432CNS0095592Slightly white alabastrum(diploid) 132.505
CNS0095593Slightly white alabastrum(diploid) 234.738
CNS0095594Slightly white alabastrum(diploid) 331.037
CNS0095595Whole white alabastrum(diploid) 228.542
CNS0095596Whole white alabastrum(diploid) 334.470
CNS0095597Whole white alabastrum(diploid) 428.461
CNS0095598Silvery flower (diploied) 130.390
CNS0095599Silvery flower (diploied) 236.196
CNS0095600Silvery flower (diploied) 356.146
CNS0095601Golden flower (diploid) 134.032
CNS0095602Golden flower (diploid) 249.249
CNS0095603Golden flower (diploid) 348.648
CNS0095604Slightly white alabastrum(tetraploid) 140.332
CNS0095605Slightly white alabastrum(tetraploid) 238.081
CNS0095606Slightly white alabastrum(tetraploid) 344.915
CNS0095607Whole white alabastrum(tetraploid) 131.046
CNS0095608Whole white alabastrum(tetraploid) 228.373
CNS0095609Whole white alabastrum(tetraploid) 345.084
CNS0095610Silvery flower (tetraploid) 169.704
CNS0095611Silvery flower (tetraploid) 270.036
CNS0095612Silvery flower (tetraploid) 365.879
CNS0095613Golden flower (tetraploid) 156.842
CNS0095614Golden flower (tetraploid) 265.893
CNS0095615Golden flower (tetraploid) 366.445
CRA001975CRR073297Stem 148.078
CRR073298Stem 244.536
CRR073299Stem 340.725
CRR073300Leaf 148.496
CRR073301Leaf 255.026
CRR073302Leaf 352.010
CRR073303Juvenile bud 152.282
CRR073304Juvenile bud 260.869
CRR073305Juvenile bud 355.904
CRR073306Third green 144.947
CRR073307Third green 248.027
CRR073308Third green 340.736
CRR073309Second white 149.599
CRR073310Second white 242.050
CRR073311Second white 338.390
CRR073312Silver flowering 143.018
CRR073313Silver flowering 239.039
CRR073314Silver flowering 333.750
CRR073315Gold flowering 125.491
CRR073316Gold flowering 231.600
CRR073317Gold flowering 321.737
CRR073318Tawny withering 140.157
CRR073319Tawny withering 240.420
CRR073320Tawny withering 345.036