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Detail information of GWHGAAZE032007
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_010656803.1
0
PREDICTED: putative lipase ROG1 isoform X2 [Vitis vinifera]
trEMBL
tr|F6GXB1|F6GXB1_VITVI
0
Putative uncharacterized protein {ECO:0000313|EMBL:CCB44597.1}
TAIR10
AT4G25770.1
9E-115
alpha/beta-Hydrolases superfamily protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000009
gene
68872106
68885473
+
GWHAAZE00000009
mRNA
68872106
68885473
+
GWHAAZE00000009
exon
68872106
68872410
+
GWHAAZE00000009
exon
68878878
68878945
+
GWHAAZE00000009
exon
68880696
68880766
+
GWHAAZE00000009
exon
68881591
68881860
+
GWHAAZE00000009
exon
68883003
68883166
+
GWHAAZE00000009
exon
68883525
68883580
+
GWHAAZE00000009
exon
68883670
68883722
+
GWHAAZE00000009
exon
68884058
68884178
+
GWHAAZE00000009
exon
68885301
68885473
+
GWHAAZE00000009
CDS
68872106
68872410
+
GWHAAZE00000009
CDS
68878878
68878945
+
GWHAAZE00000009
CDS
68880696
68880766
+
GWHAAZE00000009
CDS
68881591
68881860
+
GWHAAZE00000009
CDS
68883003
68883166
+
GWHAAZE00000009
CDS
68883525
68883580
+
GWHAAZE00000009
CDS
68883670
68883722
+
GWHAAZE00000009
CDS
68884058
68884178
+
GWHAAZE00000009
CDS
68885301
68885473
+
Transcript Sequence
>GWHTAAZE032045 ATGATCGCCGCTGCAAAATCTCCGTTAGGAACCCTAGATTCGGCAATAGTGAGACCGGAGGACCGATTTCCCCGTGGAGTGTTGTTGTTAAATTTAGGTTTTGGATTGAGATCTAGCGGGGGATTGTGTAGGTTGTCTTTTGATCGGAGTAGTGAGATGGAATTGGTTCGGAAATTGAGAAGGGGGGGATGCTTTGTGGGGAAGAGGAAAGGGCAAAAGATGGAGGTGGCGTCTATTGTTAATGGAGATGGTGTTGATGCGGCACCAGAACACCTTGTGATCATGGTTAATGGTATCATTGGAAGTGCCGCAGATTGGAGATATGCTGCTGAACAGTTTGTGAAGAGGCTTCCTGATAAAGTTATTGTTCACTGCAGTCAGTGCAATTCTTCGAGGTTGACTTTTGATGGCGTAGACCGGATGGGTGAGAGGCTAGCTGAAGAGGTGGTGGATGTAATTAGATGTTGGCCTGATGTGAACAAGATCTCATTTGTCGCACATTCGTTAGGAGGCCTTGTTGCAAGGTATGCTATTGGAAGGCTGTATGGAAACATTCTTGTTTCCTCTGGTCTGACTGGAAACTTCTCAAGCAAAGAGCATATGAATAATTTGGCACAATGCCAGCAACATTATGAAGATAGAATTGCGGGTTTAGAACCAATGAACTTTATAACATTTGCAACCCCACATCTTGGTTCTAGGGGTAACAAACAGCTTCCATTTCTTTGTGGACTTCCTTTCCTCGAAAGAAGTGCGTCTCAAACTGCACACTGGCTTGTTGGGAGATCTGGAAAGCATCTCTTCCTCACCGACAACGATGATGGGAGACCTCCCCTCCTCCTTGAAATGGTTAACGACTCAAAGGATCTTAAGTTCATGTCAGCTTTACGCTCTTTTAAGCGTCGGACAGCATATGCTAATGCAAGCTATGATCATGTGGTTGGGTGGAGAACATCATCAATCCGCCGTCAACATGAACTTCCGAAGGCCCTCCTTCTTGTGAAGGATGAGAAGTACCCCCATATTGTACACATTGAACGAGAAACAGCTGAAGACATCCAGAAGAAATCATCCTCCTTGGTGCAAACGCAAGTCATTGACTTGGAAGAGGAAATGATTAGAGGTCTCACTCAAGTACCTTGGGAACGTGTTGATGTTAGCTTTCGCAGAAGTAGGCAACGATATGCTGCACATAGTACCATCCAGGCAAGCCCTATTGTTTGCAGGATTGTTTACAATGCATGCCTCTTTTTCTACAACAATTTACATTTTAAATTTTAG
Network for GWHGAAZE032007
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
CFinderModule0173
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF05057.15
DUF676
89
318
9.60E-67
Protein Sequence
>GWHPAAZE032027 MIAAAKSPLGTLDSAIVRPEDRFPRGVLLLNLGFGLRSSGGLCRLSFDRSSEMELVRKLRRGGCFVGKRKGQKMEVASIVNGDGVDAAPEHLVIMVNGIIGSAADWRYAAEQFVKRLPDKVIVHCSQCNSSRLTFDGVDRMGERLAEEVVDVIRCWPDVNKISFVAHSLGGLVARYAIGRLYGNILVSSGLTGNFSSKEHMNNLAQCQQHYEDRIAGLEPMNFITFATPHLGSRGNKQLPFLCGLPFLERSASQTAHWLVGRSGKHLFLTDNDDGRPPLLLEMVNDSKDLKFMSALRSFKRRTAYANASYDHVVGWRTSSIRRQHELPKALLLVKDEKYPHIVHIERETAEDIQKKSSSLVQTQVIDLEEEMIRGLTQVPWERVDVSFRRSRQRYAAHSTIQASPIVCRIVYNACLFFYNNLHFKF
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
13.185
SRR3591706
second leaf
6.178
SRR3591707
mature leaf
6.176
SRR3591708
Shoot apex
9.708
SRR3591709
Stem
11.846
SRR3591710
White floral bud
12.879
SRR3591711
White flower
9.570
SRR3591712
Green floral bud
14.054
SRR3591713
Yellow flower
10.914
SRP173429
SRR8316895
Juvenile bud stage
12.004
SRR8316896
Juvenile bud stage
19.095
SRR8316897
Juvenile bud stage
8.700
SRR8316894
Third green stage
9.033
SRR8316900
Third green stage
28.098
SRR8316901
Third green stage
27.823
SRR8316898
Complete white stage
13.811
SRR8316899
Complete white stage
38.545
SRR8316903
Complete white stage
19.313
SRR8316902
Silver flowering stage
8.221
SRR8316904
Silver flowering stage
12.416
SRR8316905
Silver flowering stage
6.779
SRR8316906
Gold flowering stage
23.161
SRR8316907
Gold flowering stage
22.533
SRR8316908
Gold flowering stage
21.373
SRP132670
SRR6706286
Control
33.254
SRR6706287
Light intensity 50%
35.438
SRR6706288
Light intensity 20%
36.564
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
16.634
CNS0095593
Slightly white alabastrum(diploid) 2
19.407
CNS0095594
Slightly white alabastrum(diploid) 3
12.060
CNS0095595
Whole white alabastrum(diploid) 2
14.885
CNS0095596
Whole white alabastrum(diploid) 3
13.928
CNS0095597
Whole white alabastrum(diploid) 4
17.635
CNS0095598
Silvery flower (diploied) 1
14.101
CNS0095599
Silvery flower (diploied) 2
13.440
CNS0095600
Silvery flower (diploied) 3
20.478
CNS0095601
Golden flower (diploid) 1
14.794
CNS0095602
Golden flower (diploid) 2
16.291
CNS0095603
Golden flower (diploid) 3
17.145
CNS0095604
Slightly white alabastrum(tetraploid) 1
18.696
CNS0095605
Slightly white alabastrum(tetraploid) 2
14.901
CNS0095606
Slightly white alabastrum(tetraploid) 3
26.932
CNS0095607
Whole white alabastrum(tetraploid) 1
16.292
CNS0095608
Whole white alabastrum(tetraploid) 2
14.061
CNS0095609
Whole white alabastrum(tetraploid) 3
24.465
CNS0095610
Silvery flower (tetraploid) 1
21.664
CNS0095611
Silvery flower (tetraploid) 2
18.662
CNS0095612
Silvery flower (tetraploid) 3
21.304
CNS0095613
Golden flower (tetraploid) 1
12.371
CNS0095614
Golden flower (tetraploid) 2
17.501
CNS0095615
Golden flower (tetraploid) 3
16.186
CRA001975
CRR073297
Stem 1
22.460
CRR073298
Stem 2
22.586
CRR073299
Stem 3
19.626
CRR073300
Leaf 1
28.944
CRR073301
Leaf 2
29.835
CRR073302
Leaf 3
25.642
CRR073303
Juvenile bud 1
27.316
CRR073304
Juvenile bud 2
25.587
CRR073305
Juvenile bud 3
28.324
CRR073306
Third green 1
14.547
CRR073307
Third green 2
13.101
CRR073308
Third green 3
16.325
CRR073309
Second white 1
10.616
CRR073310
Second white 2
13.566
CRR073311
Second white 3
9.530
CRR073312
Silver flowering 1
7.390
CRR073313
Silver flowering 2
6.409
CRR073314
Silver flowering 3
6.699
CRR073315
Gold flowering 1
10.020
CRR073316
Gold flowering 2
9.681
CRR073317
Gold flowering 3
6.517
CRR073318
Tawny withering 1
12.744
CRR073319
Tawny withering 2
10.789
CRR073320
Tawny withering 3
9.840