Detail information of GWHGAAZE032007


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010656803.10PREDICTED: putative lipase ROG1 isoform X2 [Vitis vinifera]
trEMBLtr|F6GXB1|F6GXB1_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB44597.1}
TAIR10AT4G25770.19E-115alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6887210668885473+
GWHAAZE00000009mRNA6887210668885473+
GWHAAZE00000009exon6887210668872410+
GWHAAZE00000009exon6887887868878945+
GWHAAZE00000009exon6888069668880766+
GWHAAZE00000009exon6888159168881860+
GWHAAZE00000009exon6888300368883166+
GWHAAZE00000009exon6888352568883580+
GWHAAZE00000009exon6888367068883722+
GWHAAZE00000009exon6888405868884178+
GWHAAZE00000009exon6888530168885473+
GWHAAZE00000009CDS6887210668872410+
GWHAAZE00000009CDS6887887868878945+
GWHAAZE00000009CDS6888069668880766+
GWHAAZE00000009CDS6888159168881860+
GWHAAZE00000009CDS6888300368883166+
GWHAAZE00000009CDS6888352568883580+
GWHAAZE00000009CDS6888367068883722+
GWHAAZE00000009CDS6888405868884178+
GWHAAZE00000009CDS6888530168885473+
Transcript Sequence

Network for GWHGAAZE032007

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0173


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05057.15DUF676893189.60E-67
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.185
SRR3591706second leaf6.178
SRR3591707mature leaf6.176
SRR3591708Shoot apex9.708
SRR3591709Stem11.846
SRR3591710White floral bud12.879
SRR3591711White flower9.570
SRR3591712Green floral bud14.054
SRR3591713Yellow flower10.914
SRP173429 SRR8316895Juvenile bud stage 12.004
SRR8316896Juvenile bud stage 19.095
SRR8316897Juvenile bud stage 8.700
SRR8316894Third green stage 9.033
SRR8316900Third green stage 28.098
SRR8316901Third green stage 27.823
SRR8316898Complete white stage 13.811
SRR8316899Complete white stage 38.545
SRR8316903Complete white stage 19.313
SRR8316902Silver flowering stage8.221
SRR8316904Silver flowering stage12.416
SRR8316905Silver flowering stage6.779
SRR8316906Gold flowering stage 23.161
SRR8316907Gold flowering stage 22.533
SRR8316908Gold flowering stage 21.373
SRP132670SRR6706286Control33.254
SRR6706287Light intensity 50%35.438
SRR6706288Light intensity 20%36.564
CNP0000432CNS0095592Slightly white alabastrum(diploid) 116.634
CNS0095593Slightly white alabastrum(diploid) 219.407
CNS0095594Slightly white alabastrum(diploid) 312.060
CNS0095595Whole white alabastrum(diploid) 214.885
CNS0095596Whole white alabastrum(diploid) 313.928
CNS0095597Whole white alabastrum(diploid) 417.635
CNS0095598Silvery flower (diploied) 114.101
CNS0095599Silvery flower (diploied) 213.440
CNS0095600Silvery flower (diploied) 320.478
CNS0095601Golden flower (diploid) 114.794
CNS0095602Golden flower (diploid) 216.291
CNS0095603Golden flower (diploid) 317.145
CNS0095604Slightly white alabastrum(tetraploid) 118.696
CNS0095605Slightly white alabastrum(tetraploid) 214.901
CNS0095606Slightly white alabastrum(tetraploid) 326.932
CNS0095607Whole white alabastrum(tetraploid) 116.292
CNS0095608Whole white alabastrum(tetraploid) 214.061
CNS0095609Whole white alabastrum(tetraploid) 324.465
CNS0095610Silvery flower (tetraploid) 121.664
CNS0095611Silvery flower (tetraploid) 218.662
CNS0095612Silvery flower (tetraploid) 321.304
CNS0095613Golden flower (tetraploid) 112.371
CNS0095614Golden flower (tetraploid) 217.501
CNS0095615Golden flower (tetraploid) 316.186
CRA001975CRR073297Stem 122.460
CRR073298Stem 222.586
CRR073299Stem 319.626
CRR073300Leaf 128.944
CRR073301Leaf 229.835
CRR073302Leaf 325.642
CRR073303Juvenile bud 127.316
CRR073304Juvenile bud 225.587
CRR073305Juvenile bud 328.324
CRR073306Third green 114.547
CRR073307Third green 213.101
CRR073308Third green 316.325
CRR073309Second white 110.616
CRR073310Second white 213.566
CRR073311Second white 39.530
CRR073312Silver flowering 17.390
CRR073313Silver flowering 26.409
CRR073314Silver flowering 36.699
CRR073315Gold flowering 110.020
CRR073316Gold flowering 29.681
CRR073317Gold flowering 36.517
CRR073318Tawny withering 112.744
CRR073319Tawny withering 210.789
CRR073320Tawny withering 39.840