Detail information of GWHGAAZE032039


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrNP_001267857.10sucrose-phosphate synthase 1 [Vitis vinifera]
COGYP_003529338.18E-156sucrose-phosphate synthase
Swissprottr|F4JLK2|SPSA4_ARATH0Probable sucrose-phosphate synthase 4
trEMBLtr|Q5EEP9|Q5EEP9_VITVI0Sucrose-phosphate synthase 1 {ECO:0000313|EMBL:AAW82754.1}
TAIR10AT4G10120.20Sucrose-phosphate synthase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene6955412169562109-
GWHAAZE00000009mRNA6955412169562109-
GWHAAZE00000009exon6956181969562109-
GWHAAZE00000009exon6955845269558678-
GWHAAZE00000009exon6955822369558286-
GWHAAZE00000009exon6955790769558106-
GWHAAZE00000009exon6955724469557724-
GWHAAZE00000009exon6955691369557044-
GWHAAZE00000009exon6955651969556650-
GWHAAZE00000009exon6955625169556427-
GWHAAZE00000009exon6955588869555941-
GWHAAZE00000009exon6955570669555768-
GWHAAZE00000009exon6955477069555606-
GWHAAZE00000009exon6955412169554633-
GWHAAZE00000009CDS6956181969562109-
GWHAAZE00000009CDS6955845269558678-
GWHAAZE00000009CDS6955822369558286-
GWHAAZE00000009CDS6955790769558106-
GWHAAZE00000009CDS6955724469557724-
GWHAAZE00000009CDS6955691369557044-
GWHAAZE00000009CDS6955651969556650-
GWHAAZE00000009CDS6955625169556427-
GWHAAZE00000009CDS6955588869555941-
GWHAAZE00000009CDS6955570669555768-
GWHAAZE00000009CDS6955477069555606-
GWHAAZE00000009CDS6955412169554633-
Transcript Sequence

Network for GWHGAAZE032039

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00862.20Sucrose_synth1693961.50E-09
PF00534.21Glycos_transf_14726451.40E-26
PF05116.14S6PP7799298.60E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00696E2.4.1.14 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005985biological_processsucrose metabolic process
GO:0046524molecular_functionsucrose-phosphate synthase activity
GO:0016157molecular_functionsucrose synthase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.572
SRR3591706second leaf10.912
SRR3591707mature leaf128.302
SRR3591708Shoot apex1.240
SRR3591709Stem19.387
SRR3591710White floral bud6.823
SRR3591711White flower10.845
SRR3591712Green floral bud3.972
SRR3591713Yellow flower3.721
SRP173429 SRR8316895Juvenile bud stage 2.206
SRR8316896Juvenile bud stage 2.546
SRR8316897Juvenile bud stage 1.501
SRR8316894Third green stage 1.961
SRR8316900Third green stage 4.907
SRR8316901Third green stage 4.524
SRR8316898Complete white stage 3.557
SRR8316899Complete white stage 9.507
SRR8316903Complete white stage 9.832
SRR8316902Silver flowering stage5.724
SRR8316904Silver flowering stage8.445
SRR8316905Silver flowering stage2.726
SRR8316906Gold flowering stage 10.669
SRR8316907Gold flowering stage 11.708
SRR8316908Gold flowering stage 6.110
SRP132670SRR6706286Control4.872
SRR6706287Light intensity 50%4.350
SRR6706288Light intensity 20%4.230
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.344
CNS0095593Slightly white alabastrum(diploid) 210.618
CNS0095594Slightly white alabastrum(diploid) 310.269
CNS0095595Whole white alabastrum(diploid) 29.009
CNS0095596Whole white alabastrum(diploid) 38.516
CNS0095597Whole white alabastrum(diploid) 411.837
CNS0095598Silvery flower (diploied) 110.303
CNS0095599Silvery flower (diploied) 28.998
CNS0095600Silvery flower (diploied) 37.169
CNS0095601Golden flower (diploid) 14.648
CNS0095602Golden flower (diploid) 26.140
CNS0095603Golden flower (diploid) 35.573
CNS0095604Slightly white alabastrum(tetraploid) 16.916
CNS0095605Slightly white alabastrum(tetraploid) 210.275
CNS0095606Slightly white alabastrum(tetraploid) 35.616
CNS0095607Whole white alabastrum(tetraploid) 113.209
CNS0095608Whole white alabastrum(tetraploid) 27.970
CNS0095609Whole white alabastrum(tetraploid) 33.636
CNS0095610Silvery flower (tetraploid) 113.694
CNS0095611Silvery flower (tetraploid) 24.181
CNS0095612Silvery flower (tetraploid) 33.894
CNS0095613Golden flower (tetraploid) 111.779
CNS0095614Golden flower (tetraploid) 29.845
CNS0095615Golden flower (tetraploid) 34.992
CRA001975CRR073297Stem 13.668
CRR073298Stem 23.086
CRR073299Stem 32.867
CRR073300Leaf 17.283
CRR073301Leaf 27.478
CRR073302Leaf 33.622
CRR073303Juvenile bud 19.072
CRR073304Juvenile bud 24.912
CRR073305Juvenile bud 316.342
CRR073306Third green 14.626
CRR073307Third green 26.310
CRR073308Third green 37.009
CRR073309Second white 14.850
CRR073310Second white 24.135
CRR073311Second white 33.577
CRR073312Silver flowering 12.249
CRR073313Silver flowering 21.519
CRR073314Silver flowering 32.697
CRR073315Gold flowering 145.886
CRR073316Gold flowering 280.465
CRR073317Gold flowering 361.018
CRR073318Tawny withering 12.368
CRR073319Tawny withering 24.976
CRR073320Tawny withering 32.419