Detail information of GWHGAAZE032084


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010656520.12.88792E-62PREDICTED: uncharacterized protein LOC100267845 isoform X1 [Vitis vinifera]
trEMBLtr|A5AFH6|A5AFH6_VITVI2E-62Putative uncharacterized protein {ECO:0000313|EMBL:CAN71231.1}
TAIR10AT1G75400.10.0000005RING/U-box superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene7023795970239742-
GWHAAZE00000009mRNA7023795970239742-
GWHAAZE00000009exon7023941870239742-
GWHAAZE00000009exon7023795970238625-
GWHAAZE00000009CDS7023941870239742-
GWHAAZE00000009CDS7023831570238625-
GWHAAZE00000009three_prime_UTR7023795970238314-
Transcript Sequence

Network for GWHGAAZE032084

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.674
SRR3591706second leaf11.055
SRR3591707mature leaf10.377
SRR3591708Shoot apex13.625
SRR3591709Stem17.516
SRR3591710White floral bud27.378
SRR3591711White flower17.541
SRR3591712Green floral bud14.243
SRR3591713Yellow flower9.800
SRP173429 SRR8316895Juvenile bud stage 5.313
SRR8316896Juvenile bud stage 6.658
SRR8316897Juvenile bud stage 2.555
SRR8316894Third green stage 2.773
SRR8316900Third green stage 7.727
SRR8316901Third green stage 9.561
SRR8316898Complete white stage 3.461
SRR8316899Complete white stage 13.717
SRR8316903Complete white stage 6.291
SRR8316902Silver flowering stage5.880
SRR8316904Silver flowering stage7.646
SRR8316905Silver flowering stage3.171
SRR8316906Gold flowering stage 7.995
SRR8316907Gold flowering stage 8.216
SRR8316908Gold flowering stage 7.630
SRP132670SRR6706286Control7.413
SRR6706287Light intensity 50%9.725
SRR6706288Light intensity 20%10.686
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.566
CNS0095593Slightly white alabastrum(diploid) 28.883
CNS0095594Slightly white alabastrum(diploid) 39.518
CNS0095595Whole white alabastrum(diploid) 27.223
CNS0095596Whole white alabastrum(diploid) 35.687
CNS0095597Whole white alabastrum(diploid) 47.437
CNS0095598Silvery flower (diploied) 111.086
CNS0095599Silvery flower (diploied) 29.011
CNS0095600Silvery flower (diploied) 39.692
CNS0095601Golden flower (diploid) 19.017
CNS0095602Golden flower (diploid) 29.363
CNS0095603Golden flower (diploid) 310.207
CNS0095604Slightly white alabastrum(tetraploid) 18.075
CNS0095605Slightly white alabastrum(tetraploid) 29.058
CNS0095606Slightly white alabastrum(tetraploid) 311.619
CNS0095607Whole white alabastrum(tetraploid) 15.186
CNS0095608Whole white alabastrum(tetraploid) 24.937
CNS0095609Whole white alabastrum(tetraploid) 38.572
CNS0095610Silvery flower (tetraploid) 18.489
CNS0095611Silvery flower (tetraploid) 28.190
CNS0095612Silvery flower (tetraploid) 39.596
CNS0095613Golden flower (tetraploid) 14.657
CNS0095614Golden flower (tetraploid) 25.505
CNS0095615Golden flower (tetraploid) 36.056
CRA001975CRR073297Stem 113.297
CRR073298Stem 213.486
CRR073299Stem 317.479
CRR073300Leaf 113.150
CRR073301Leaf 213.645
CRR073302Leaf 313.079
CRR073303Juvenile bud 112.797
CRR073304Juvenile bud 214.823
CRR073305Juvenile bud 317.532
CRR073306Third green 117.608
CRR073307Third green 216.622
CRR073308Third green 317.603
CRR073309Second white 110.615
CRR073310Second white 29.187
CRR073311Second white 310.676
CRR073312Silver flowering 110.778
CRR073313Silver flowering 27.658
CRR073314Silver flowering 313.013
CRR073315Gold flowering 119.639
CRR073316Gold flowering 214.324
CRR073317Gold flowering 315.498
CRR073318Tawny withering 118.742
CRR073319Tawny withering 221.982
CRR073320Tawny withering 315.884