Detail information of GWHGAAZE032101


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP10499.12.1707E-139unnamed protein product [Coffea canephora]
Swissprottr|P0C897|Y3264_ARATH3E-81Putative UPF0481 protein At3g02645
trEMBLtr|A0A068UQF7|A0A068UQF7_COFCA8E-140Coffea canephora DH200=94 genomic scaffold, scaffold_45 {ECO:0000313|EMBL:CDP10499.1}
TAIR10AT3G02645.11E-67Plant protein of unknown function (DUF247)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene7051927170520788-
GWHAAZE00000009mRNA7051927170520788-
GWHAAZE00000009exon7051927170520788-
GWHAAZE00000009CDS7051927170520788-
Transcript Sequence

Network for GWHGAAZE032101

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03140.16DUF247404812.50E-83
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.070
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.047
SRR3591709Stem0.000
SRR3591710White floral bud0.043
SRR3591711White flower0.163
SRR3591712Green floral bud0.043
SRR3591713Yellow flower4.448
SRP173429 SRR8316895Juvenile bud stage 0.171
SRR8316896Juvenile bud stage 0.000
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.049
SRR8316902Silver flowering stage0.048
SRR8316904Silver flowering stage0.083
SRR8316905Silver flowering stage0.131
SRR8316906Gold flowering stage 2.377
SRR8316907Gold flowering stage 1.884
SRR8316908Gold flowering stage 2.376
SRP132670SRR6706286Control0.017
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.000
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.353
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.069
CNS0095595Whole white alabastrum(diploid) 20.112
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.101
CNS0095598Silvery flower (diploied) 11.075
CNS0095599Silvery flower (diploied) 20.107
CNS0095600Silvery flower (diploied) 30.108
CNS0095601Golden flower (diploid) 11.480
CNS0095602Golden flower (diploid) 21.930
CNS0095603Golden flower (diploid) 32.079
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.143
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.085
CNS0095613Golden flower (tetraploid) 11.241
CNS0095614Golden flower (tetraploid) 20.654
CNS0095615Golden flower (tetraploid) 30.705
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.000
CRR073299Stem 30.000
CRR073300Leaf 10.000
CRR073301Leaf 20.000
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.025
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.274
CRR073311Second white 30.216
CRR073312Silver flowering 12.466
CRR073313Silver flowering 20.486
CRR073314Silver flowering 31.233
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.006
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000