Gene detail

Detail information of GWHGAAZE032121

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_008243100.1	0	PREDICTED: uncharacterized protein LOC103341365, partial [Prunus mume]
COG	YP_156226.1	1E-48	adenylate kinase
Swissprot	tr\|Q8VYL1\|KAD5_ARATH	0	Adenylate kinase 5, chloroplastic (Precursor)
trEMBL	tr\|K4DCC5\|K4DCC5_SOLLC	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc12g010380.1.1}
TAIR10	AT5G35170.1	0	adenylate kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	71020130	71026410	+
GWHAAZE00000009	mRNA	71020130	71026410	+
GWHAAZE00000009	exon	71020130	71020231	+
GWHAAZE00000009	exon	71022133	71022261	+
GWHAAZE00000009	exon	71022348	71022482	+
GWHAAZE00000009	exon	71022634	71022780	+
GWHAAZE00000009	exon	71022974	71023048	+
GWHAAZE00000009	exon	71023229	71023326	+
GWHAAZE00000009	exon	71023571	71023763	+
GWHAAZE00000009	exon	71023910	71023945	+
GWHAAZE00000009	exon	71024019	71024099	+
GWHAAZE00000009	exon	71024186	71024324	+
GWHAAZE00000009	exon	71024601	71024680	+
GWHAAZE00000009	exon	71024802	71024867	+
GWHAAZE00000009	exon	71025081	71025110	+
GWHAAZE00000009	exon	71025231	71025340	+
GWHAAZE00000009	exon	71026124	71026261	+
GWHAAZE00000009	exon	71026377	71026410	+
GWHAAZE00000009	CDS	71020130	71020231	+
GWHAAZE00000009	CDS	71022133	71022261	+
GWHAAZE00000009	CDS	71022348	71022482	+
GWHAAZE00000009	CDS	71022634	71022780	+
GWHAAZE00000009	CDS	71022974	71023048	+
GWHAAZE00000009	CDS	71023229	71023326	+
GWHAAZE00000009	CDS	71023571	71023763	+
GWHAAZE00000009	CDS	71023910	71023945	+
GWHAAZE00000009	CDS	71024019	71024099	+
GWHAAZE00000009	CDS	71024186	71024324	+
GWHAAZE00000009	CDS	71024601	71024680	+
GWHAAZE00000009	CDS	71024802	71024867	+
GWHAAZE00000009	CDS	71025081	71025110	+
GWHAAZE00000009	CDS	71025231	71025340	+
GWHAAZE00000009	CDS	71026124	71026261	+
GWHAAZE00000009	CDS	71026377	71026410	+

Transcript Sequence
>GWHTAAZE032159 GGATTGAAGTTGGTATGTTCACAAAGCGAACCATTGAAGGTTATGATATCGGGTGCACCTGCATCAGGTAAAGGGACTCAATGTGAGATGATTGTTCAACAGTTTGGATTAGTGCACATATCAACTGGAGATCTTCTTCGAGCTGAAGTATCAGCCGGTTCAGAAATCGGAAACAAAGCAAAAGAATACATGAACACTGGCTGTCTAGTTCCAGATGAAATTGTGACTGATATGGTTACAGGAAGATTATCGCAGAAAGATGCAAAAGAGAAAGGATGGCTTCTAGATGGATACCCGCGAAGTTTTGACCAAGCACAAAGTCTTGAAAAATTAAAGATTATACCAGATGTGTACATTTCACTAGATGTCCCTGATGAAATTCTAATCGACAGATGTGTTGGTAGAAGGCTGGATCCAGTAACAGGGAAGATTTACCATATCAAAAATCTCCCTCCACAAACAGAAGAAATTAAAGCAAGGCTTGTAACTCGACCTGATGACACTGAGGAAAAGGTCAAATCACGCCTGCAAATATATAAGCAGAATGTGGAAGCAATTTTATCCACATATGAGGACATACTAAAGAAGATTGATGGAAACCGTCCAAAAGAGGTCATTTTTGAAGAAATATACTCATTGATGTCACAGGTGCAACAAGAGAAAGTAAAGGCAACAAAATTAGGCAAGCAAGAGGTAGATTTATTAATAATTCAATATCCTTTGCTTATTTTGCTTTTTATCCTTTTTCAGGAAAGTTGGAGAGGAATTCCCACTAGATTGAATAACATTCCTCATTCTAGAGAAATTAGAGAATATTTCTATGATGATGTGCTGCAGGCTACCCAAAGAGCTATAAATGATGGAAAAACCCGATTAAAGGTGGAGATCAATATTCCAGAGCTCAACCCCGAAATGGATGTATACCGAATAGGTACTTTAATGGAACTTGTTCGAGCTCTCTCTTTATCATTTGCTGATGATGGAAAACGGATCAAGGTCTGTGTTCAAGGGTCTATGGGGGAAGGTGCTCTTGCAGGAATGCCATTGCAGCTTGCGGGAACAAGAAAGATCTTGGAGTACATGGATTGGGGTGAATATGGTGCCAAGGGAAACTTTATCAATCTTGGTTCTATAGGTGGAAAGGAGGTTGAGGAGCAAGATGACATATTTATTTTAGTTGCTCCTCAAAATGCTGTGGGGAATTGCATCATTGATGACCTAAGAGCAATGACTGATGCTGCAGGTAGCCGTCCAGTCATTCTTATCAACCCTAGGCTTAAGGATTTACCGGCTTCCAGTGGCATCATGCAAACAATGGGTAGAGACAAGCGATTGGAGTATGCTGCCTCGTTCGAGATTTGCTATATCTTTCGCCTTCTTTACTACGCAGGGACCCAATATCCAATTATCGGTGCTCTAAGGATGTCTTACCCGTACCGATATGAAGTATACAAGAGGGTGAACGACTCGACAGGAAAGGAGAAATATACTATCTTGTCAACATTTCCAAAGAGGCCTGACATTGATGAAATCAACGATGCATTCGAAGGAAGAACAAGAGATCAAGCTAAAAAGGCCTCAGGATTCTGGTAA

Network for GWHGAAZE032121

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00406.23	ADK	16	192	1.20E-49
PF09353.11	DUF1995	270	512	6.20E-41

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00939	adk, AK	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Purine metabolism	map00230
		Thiamine metabolism	map00730

Gene Ontology

GO term	Ontology	Name
GO:0006139	biological_process	nucleobase-containing compound metabolic process
GO:0005524	molecular_function	ATP binding
GO:0019205	molecular_function	nucleobase-containing compound kinase activity
GO:0004017	molecular_function	adenylate kinase activity
GO:0016776	molecular_function	phosphotransferase activity, phosphate group as acceptor

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	12.856
	SRR3591706	second leaf	90.527
	SRR3591707	mature leaf	111.776
	SRR3591708	Shoot apex	21.352
	SRR3591709	Stem	10.555
	SRR3591710	White floral bud	4.002
	SRR3591711	White flower	7.531
	SRR3591712	Green floral bud	4.334
	SRR3591713	Yellow flower	6.262
SRP173429	SRR8316895	Juvenile bud stage	6.528
	SRR8316896	Juvenile bud stage	9.512
	SRR8316897	Juvenile bud stage	4.859
	SRR8316894	Third green stage	3.008
	SRR8316900	Third green stage	3.952
	SRR8316901	Third green stage	5.657
	SRR8316898	Complete white stage	1.260
	SRR8316899	Complete white stage	4.270
	SRR8316903	Complete white stage	2.085
	SRR8316902	Silver flowering stage	0.486
	SRR8316904	Silver flowering stage	1.297
	SRR8316905	Silver flowering stage	0.420
	SRR8316906	Gold flowering stage	1.833
	SRR8316907	Gold flowering stage	1.070
	SRR8316908	Gold flowering stage	1.749
SRP132670	SRR6706286	Control	4.211
	SRR6706287	Light intensity 50%	3.738
	SRR6706288	Light intensity 20%	3.929
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	6.743
	CNS0095593	Slightly white alabastrum(diploid) 2	4.973
	CNS0095594	Slightly white alabastrum(diploid) 3	5.328
	CNS0095595	Whole white alabastrum(diploid) 2	2.348
	CNS0095596	Whole white alabastrum(diploid) 3	1.999
	CNS0095597	Whole white alabastrum(diploid) 4	3.010
	CNS0095598	Silvery flower (diploied) 1	9.105
	CNS0095599	Silvery flower (diploied) 2	4.703
	CNS0095600	Silvery flower (diploied) 3	3.598
	CNS0095601	Golden flower (diploid) 1	5.621
	CNS0095602	Golden flower (diploid) 2	6.956
	CNS0095603	Golden flower (diploid) 3	6.433
	CNS0095604	Slightly white alabastrum(tetraploid) 1	5.898
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.869
	CNS0095606	Slightly white alabastrum(tetraploid) 3	13.237
	CNS0095607	Whole white alabastrum(tetraploid) 1	2.167
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.348
	CNS0095609	Whole white alabastrum(tetraploid) 3	5.801
	CNS0095610	Silvery flower (tetraploid) 1	9.587
	CNS0095611	Silvery flower (tetraploid) 2	8.013
	CNS0095612	Silvery flower (tetraploid) 3	5.208
	CNS0095613	Golden flower (tetraploid) 1	6.720
	CNS0095614	Golden flower (tetraploid) 2	10.352
	CNS0095615	Golden flower (tetraploid) 3	2.127
CRA001975	CRR073297	Stem 1	5.687
	CRR073298	Stem 2	5.072
	CRR073299	Stem 3	3.208
	CRR073300	Leaf 1	2.063
	CRR073301	Leaf 2	2.632
	CRR073302	Leaf 3	1.783
	CRR073303	Juvenile bud 1	1.514
	CRR073304	Juvenile bud 2	0.763
	CRR073305	Juvenile bud 3	1.380
	CRR073306	Third green 1	0.386
	CRR073307	Third green 2	0.302
	CRR073308	Third green 3	0.265
	CRR073309	Second white 1	0.288
	CRR073310	Second white 2	0.496
	CRR073311	Second white 3	0.317
	CRR073312	Silver flowering 1	0.393
	CRR073313	Silver flowering 2	0.115
	CRR073314	Silver flowering 3	0.281
	CRR073315	Gold flowering 1	28.293
	CRR073316	Gold flowering 2	45.693
	CRR073317	Gold flowering 3	17.789
	CRR073318	Tawny withering 1	2.880
	CRR073319	Tawny withering 2	3.351
	CRR073320	Tawny withering 3	3.055