Detail information of GWHGAAZE032135


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007204634.10hypothetical protein PRUPE_ppa002009mg [Prunus persica]
COGYP_007146068.13E-23chitinase
Swissprottr|O64793|Y1675_ARATH2E-32G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 (Precursor)
trEMBLtr|M5W998|M5W998_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ05833.1}
TAIR10AT4G19810.14E-76Glycosyl hydrolase family protein with chitinase insertion domain

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene7119221471195263-
GWHAAZE00000009mRNA7119221471195263-
GWHAAZE00000009exon7119221471192452-
GWHAAZE00000009exon7119314971193227-
GWHAAZE00000009exon7119366671193805-
GWHAAZE00000009exon7119415971195263-
GWHAAZE00000009CDS7119415971195263-
GWHAAZE00000009CDS7119366671193805-
GWHAAZE00000009CDS7119314971193227-
GWHAAZE00000009CDS7119221471192452-
Transcript Sequence

Network for GWHGAAZE032135

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00704.29Glyco_hydro_18433597.40E-57
PF00069.26Pkinase4465107.70E-12
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_DLSV

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0005975biological_processcarbohydrate metabolic process
GO:0004672molecular_functionprotein kinase activity
GO:0008061molecular_functionchitin binding
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf8.889
SRR3591706second leaf3.065
SRR3591707mature leaf3.399
SRR3591708Shoot apex2.466
SRR3591709Stem11.623
SRR3591710White floral bud9.954
SRR3591711White flower39.778
SRR3591712Green floral bud10.041
SRR3591713Yellow flower52.758
SRP173429 SRR8316895Juvenile bud stage 10.723
SRR8316896Juvenile bud stage 13.365
SRR8316897Juvenile bud stage 7.966
SRR8316894Third green stage 7.111
SRR8316900Third green stage 11.445
SRR8316901Third green stage 11.704
SRR8316898Complete white stage 10.775
SRR8316899Complete white stage 18.528
SRR8316903Complete white stage 21.945
SRR8316902Silver flowering stage29.093
SRR8316904Silver flowering stage45.327
SRR8316905Silver flowering stage14.699
SRR8316906Gold flowering stage 46.441
SRR8316907Gold flowering stage 48.046
SRR8316908Gold flowering stage 32.263
SRP132670SRR6706286Control11.448
SRR6706287Light intensity 50%11.405
SRR6706288Light intensity 20%11.906
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.670
CNS0095593Slightly white alabastrum(diploid) 23.123
CNS0095594Slightly white alabastrum(diploid) 37.249
CNS0095595Whole white alabastrum(diploid) 25.050
CNS0095596Whole white alabastrum(diploid) 33.259
CNS0095597Whole white alabastrum(diploid) 45.849
CNS0095598Silvery flower (diploied) 19.454
CNS0095599Silvery flower (diploied) 28.977
CNS0095600Silvery flower (diploied) 361.246
CNS0095601Golden flower (diploid) 18.716
CNS0095602Golden flower (diploid) 237.378
CNS0095603Golden flower (diploid) 336.804
CNS0095604Slightly white alabastrum(tetraploid) 11.776
CNS0095605Slightly white alabastrum(tetraploid) 21.123
CNS0095606Slightly white alabastrum(tetraploid) 32.324
CNS0095607Whole white alabastrum(tetraploid) 11.670
CNS0095608Whole white alabastrum(tetraploid) 22.028
CNS0095609Whole white alabastrum(tetraploid) 35.592
CNS0095610Silvery flower (tetraploid) 110.615
CNS0095611Silvery flower (tetraploid) 24.604
CNS0095612Silvery flower (tetraploid) 32.543
CNS0095613Golden flower (tetraploid) 11.739
CNS0095614Golden flower (tetraploid) 24.752
CNS0095615Golden flower (tetraploid) 39.637
CRA001975CRR073297Stem 18.260
CRR073298Stem 26.250
CRR073299Stem 34.644
CRR073300Leaf 18.789
CRR073301Leaf 28.516
CRR073302Leaf 35.734
CRR073303Juvenile bud 19.322
CRR073304Juvenile bud 29.446
CRR073305Juvenile bud 316.614
CRR073306Third green 17.821
CRR073307Third green 28.162
CRR073308Third green 37.521
CRR073309Second white 17.718
CRR073310Second white 27.868
CRR073311Second white 36.254
CRR073312Silver flowering 110.701
CRR073313Silver flowering 211.297
CRR073314Silver flowering 314.048
CRR073315Gold flowering 11.188
CRR073316Gold flowering 21.768
CRR073317Gold flowering 30.465
CRR073318Tawny withering 13.531
CRR073319Tawny withering 22.620
CRR073320Tawny withering 32.846