Detail information of GWHGAAZE032202


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007222381.10hypothetical protein PRUPE_ppa006006mg [Prunus persica]
COGYP_003710181.12E-109NAD-dependent epimerase/dehydratase
Swissprottr|Q9M0B6|GAE1_ARATH0UDP-glucuronate 4-epimerase 1
trEMBLtr|M5XWL7|M5XWL7_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ23580.1}
TAIR10AT4G30440.10UDP-D-glucuronate 4-epimerase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene7262729572628479-
GWHAAZE00000009mRNA7262729572628479-
GWHAAZE00000009exon7262729572628479-
GWHAAZE00000009CDS7262729572628479-
Transcript Sequence

Network for GWHGAAZE032202

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16363.6GDP_Man_Dehyd573762.40E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08679E5.1.3.6 Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf163.577
SRR3591706second leaf41.538
SRR3591707mature leaf14.676
SRR3591708Shoot apex60.254
SRR3591709Stem95.433
SRR3591710White floral bud62.333
SRR3591711White flower35.305
SRR3591712Green floral bud63.349
SRR3591713Yellow flower6.239
SRP173429 SRR8316895Juvenile bud stage 66.483
SRR8316896Juvenile bud stage 65.347
SRR8316897Juvenile bud stage 46.768
SRR8316894Third green stage 24.190
SRR8316900Third green stage 48.629
SRR8316901Third green stage 65.070
SRR8316898Complete white stage 3.355
SRR8316899Complete white stage 92.389
SRR8316903Complete white stage 3.720
SRR8316902Silver flowering stage1.652
SRR8316904Silver flowering stage2.084
SRR8316905Silver flowering stage0.635
SRR8316906Gold flowering stage 1.477
SRR8316907Gold flowering stage 0.864
SRR8316908Gold flowering stage 0.889
SRP132670SRR6706286Control24.133
SRR6706287Light intensity 50%26.872
SRR6706288Light intensity 20%21.757
CNP0000432CNS0095592Slightly white alabastrum(diploid) 152.891
CNS0095593Slightly white alabastrum(diploid) 265.764
CNS0095594Slightly white alabastrum(diploid) 355.267
CNS0095595Whole white alabastrum(diploid) 271.885
CNS0095596Whole white alabastrum(diploid) 337.688
CNS0095597Whole white alabastrum(diploid) 483.588
CNS0095598Silvery flower (diploied) 1148.820
CNS0095599Silvery flower (diploied) 2153.969
CNS0095600Silvery flower (diploied) 348.181
CNS0095601Golden flower (diploid) 1119.207
CNS0095602Golden flower (diploid) 283.266
CNS0095603Golden flower (diploid) 373.213
CNS0095604Slightly white alabastrum(tetraploid) 120.877
CNS0095605Slightly white alabastrum(tetraploid) 224.688
CNS0095606Slightly white alabastrum(tetraploid) 317.260
CNS0095607Whole white alabastrum(tetraploid) 151.754
CNS0095608Whole white alabastrum(tetraploid) 273.285
CNS0095609Whole white alabastrum(tetraploid) 332.231
CNS0095610Silvery flower (tetraploid) 12.616
CNS0095611Silvery flower (tetraploid) 24.844
CNS0095612Silvery flower (tetraploid) 315.288
CNS0095613Golden flower (tetraploid) 11.824
CNS0095614Golden flower (tetraploid) 21.124
CNS0095615Golden flower (tetraploid) 35.074
CRA001975CRR073297Stem 170.158
CRR073298Stem 275.090
CRR073299Stem 392.374
CRR073300Leaf 1122.976
CRR073301Leaf 2146.332
CRR073302Leaf 388.161
CRR073303Juvenile bud 1112.223
CRR073304Juvenile bud 292.253
CRR073305Juvenile bud 3176.643
CRR073306Third green 131.801
CRR073307Third green 250.966
CRR073308Third green 337.734
CRR073309Second white 15.249
CRR073310Second white 24.230
CRR073311Second white 31.880
CRR073312Silver flowering 110.273
CRR073313Silver flowering 216.308
CRR073314Silver flowering 38.470
CRR073315Gold flowering 156.988
CRR073316Gold flowering 297.065
CRR073317Gold flowering 364.906
CRR073318Tawny withering 187.474
CRR073319Tawny withering 2124.235
CRR073320Tawny withering 395.721