Detail information of GWHGAAZE032213


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002271446.10PREDICTED: GPI mannosyltransferase 3 [Vitis vinifera]
COGYP_005015751.10.000000001Alg9-like mannosyltransferase family protein
Swissprottr|A8MR93|ALG12_ARATH0.00000003Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase
trEMBLtr|D7U1I6|D7U1I6_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI36602.3}
TAIR10AT5G14850.11E-179Alg9-like mannosyltransferase family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene7284905472857002-
GWHAAZE00000009mRNA7284905472857002-
GWHAAZE00000009exon7285673172857002-
GWHAAZE00000009exon7285647672856593-
GWHAAZE00000009exon7285448072854623-
GWHAAZE00000009exon7285355072853836-
GWHAAZE00000009exon7285257072852851-
GWHAAZE00000009exon7285153872851739-
GWHAAZE00000009exon7285062072850771-
GWHAAZE00000009exon7284976072849933-
GWHAAZE00000009exon7284905472849126-
GWHAAZE00000009CDS7285673172857002-
GWHAAZE00000009CDS7285647672856593-
GWHAAZE00000009CDS7285448072854623-
GWHAAZE00000009CDS7285355072853836-
GWHAAZE00000009CDS7285257072852851-
GWHAAZE00000009CDS7285153872851739-
GWHAAZE00000009CDS7285062072850771-
GWHAAZE00000009CDS7284976072849933-
GWHAAZE00000009CDS7284905472849126-
Transcript Sequence

Network for GWHGAAZE032213

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03901.18Glyco_transf_22414732.00E-104
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05286PIGB Metabolic pathways map01100
Glycosylphosphatidylinositolmap00563

Gene Ontology

GO term OntologyName
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.495
SRR3591706second leaf7.332
SRR3591707mature leaf3.803
SRR3591708Shoot apex5.692
SRR3591709Stem5.964
SRR3591710White floral bud5.997
SRR3591711White flower4.451
SRR3591712Green floral bud8.838
SRR3591713Yellow flower4.474
SRP173429 SRR8316895Juvenile bud stage 3.335
SRR8316896Juvenile bud stage 5.367
SRR8316897Juvenile bud stage 2.761
SRR8316894Third green stage 2.608
SRR8316900Third green stage 4.694
SRR8316901Third green stage 5.420
SRR8316898Complete white stage 1.560
SRR8316899Complete white stage 4.285
SRR8316903Complete white stage 1.906
SRR8316902Silver flowering stage1.045
SRR8316904Silver flowering stage2.257
SRR8316905Silver flowering stage0.958
SRR8316906Gold flowering stage 2.711
SRR8316907Gold flowering stage 1.937
SRR8316908Gold flowering stage 2.060
SRP132670SRR6706286Control2.466
SRR6706287Light intensity 50%2.806
SRR6706288Light intensity 20%3.684
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.187
CNS0095593Slightly white alabastrum(diploid) 23.889
CNS0095594Slightly white alabastrum(diploid) 32.844
CNS0095595Whole white alabastrum(diploid) 23.773
CNS0095596Whole white alabastrum(diploid) 33.733
CNS0095597Whole white alabastrum(diploid) 44.141
CNS0095598Silvery flower (diploied) 13.468
CNS0095599Silvery flower (diploied) 22.846
CNS0095600Silvery flower (diploied) 33.789
CNS0095601Golden flower (diploid) 12.472
CNS0095602Golden flower (diploid) 24.841
CNS0095603Golden flower (diploid) 34.043
CNS0095604Slightly white alabastrum(tetraploid) 15.968
CNS0095605Slightly white alabastrum(tetraploid) 24.729
CNS0095606Slightly white alabastrum(tetraploid) 37.030
CNS0095607Whole white alabastrum(tetraploid) 15.325
CNS0095608Whole white alabastrum(tetraploid) 24.864
CNS0095609Whole white alabastrum(tetraploid) 35.951
CNS0095610Silvery flower (tetraploid) 13.773
CNS0095611Silvery flower (tetraploid) 25.891
CNS0095612Silvery flower (tetraploid) 34.789
CNS0095613Golden flower (tetraploid) 12.431
CNS0095614Golden flower (tetraploid) 23.856
CNS0095615Golden flower (tetraploid) 33.587
CRA001975CRR073297Stem 12.969
CRR073298Stem 23.586
CRR073299Stem 31.838
CRR073300Leaf 12.445
CRR073301Leaf 22.098
CRR073302Leaf 32.240
CRR073303Juvenile bud 11.690
CRR073304Juvenile bud 21.091
CRR073305Juvenile bud 32.299
CRR073306Third green 10.401
CRR073307Third green 21.244
CRR073308Third green 30.937
CRR073309Second white 11.780
CRR073310Second white 21.611
CRR073311Second white 30.984
CRR073312Silver flowering 11.121
CRR073313Silver flowering 21.912
CRR073314Silver flowering 31.076
CRR073315Gold flowering 12.938
CRR073316Gold flowering 23.143
CRR073317Gold flowering 32.344
CRR073318Tawny withering 11.553
CRR073319Tawny withering 21.708
CRR073320Tawny withering 32.899