Detail information of GWHGAAZE032252


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010649804.14.79353E-43PREDICTED: uncharacterized protein LOC100266667 [Vitis vinifera]
trEMBLtr|F6HDI8|F6HDI8_VITVI2E-47Putative uncharacterized protein {ECO:0000313|EMBL:CCB50359.1}
TAIR10AT3G21480.10.000009BRCT domain-containing DNA repair protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000010gene329846332723-
GWHAAZE00000010mRNA329846332723-
GWHAAZE00000010exon332696332723-
GWHAAZE00000010exon331921332067-
GWHAAZE00000010exon330597331013-
GWHAAZE00000010exon329846330234-
GWHAAZE00000010CDS332696332723-
GWHAAZE00000010CDS331921332067-
GWHAAZE00000010CDS330597331013-
GWHAAZE00000010CDS329846330234-
Transcript Sequence

Network for GWHGAAZE032252

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.902
SRR3591706second leaf0.362
SRR3591707mature leaf0.334
SRR3591708Shoot apex0.655
SRR3591709Stem2.558
SRR3591710White floral bud0.066
SRR3591711White flower0.076
SRR3591712Green floral bud0.052
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 4.623
SRR8316896Juvenile bud stage 5.899
SRR8316897Juvenile bud stage 0.290
SRR8316894Third green stage 2.557
SRR8316900Third green stage 3.948
SRR8316901Third green stage 5.240
SRR8316898Complete white stage 1.583
SRR8316899Complete white stage 5.454
SRR8316903Complete white stage 3.598
SRR8316902Silver flowering stage2.599
SRR8316904Silver flowering stage3.115
SRR8316905Silver flowering stage2.679
SRR8316906Gold flowering stage 5.141
SRR8316907Gold flowering stage 4.750
SRR8316908Gold flowering stage 1.313
SRP132670SRR6706286Control5.445
SRR6706287Light intensity 50%5.826
SRR6706288Light intensity 20%6.351
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.356
CNS0095593Slightly white alabastrum(diploid) 25.270
CNS0095594Slightly white alabastrum(diploid) 33.865
CNS0095595Whole white alabastrum(diploid) 24.163
CNS0095596Whole white alabastrum(diploid) 32.606
CNS0095597Whole white alabastrum(diploid) 41.520
CNS0095598Silvery flower (diploied) 14.917
CNS0095599Silvery flower (diploied) 24.352
CNS0095600Silvery flower (diploied) 33.214
CNS0095601Golden flower (diploid) 14.951
CNS0095602Golden flower (diploid) 22.813
CNS0095603Golden flower (diploid) 32.407
CNS0095604Slightly white alabastrum(tetraploid) 10.595
CNS0095605Slightly white alabastrum(tetraploid) 20.652
CNS0095606Slightly white alabastrum(tetraploid) 30.345
CNS0095607Whole white alabastrum(tetraploid) 10.354
CNS0095608Whole white alabastrum(tetraploid) 20.194
CNS0095609Whole white alabastrum(tetraploid) 30.283
CNS0095610Silvery flower (tetraploid) 10.660
CNS0095611Silvery flower (tetraploid) 20.341
CNS0095612Silvery flower (tetraploid) 30.096
CNS0095613Golden flower (tetraploid) 10.113
CNS0095614Golden flower (tetraploid) 20.299
CNS0095615Golden flower (tetraploid) 30.057
CRA001975CRR073297Stem 14.918
CRR073298Stem 23.841
CRR073299Stem 30.796
CRR073300Leaf 14.390
CRR073301Leaf 26.367
CRR073302Leaf 31.628
CRR073303Juvenile bud 10.714
CRR073304Juvenile bud 20.033
CRR073305Juvenile bud 30.940
CRR073306Third green 10.000
CRR073307Third green 20.158
CRR073308Third green 30.169
CRR073309Second white 10.000
CRR073310Second white 20.233
CRR073311Second white 30.138
CRR073312Silver flowering 10.097
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.170
CRR073315Gold flowering 10.560
CRR073316Gold flowering 20.095
CRR073317Gold flowering 30.000
CRR073318Tawny withering 11.741
CRR073319Tawny withering 21.937
CRR073320Tawny withering 31.874