Detail information of GWHGAAZE032295


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009594635.18.4439E-28PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP43-like [Nicotiana tomentosiformis]
Swissprottr|F4J9Q6|FKB43_ARATH6E-19Peptidyl-prolyl cis-trans isomerase FKBP43
trEMBLtr|A0A067ELB9|A0A067ELB9_CITSI2E-17Uncharacterized protein {ECO:0000313|EMBL:KDO55989.1} (Fragment)
TAIR10AT3G12340.17E-18FKBP-like peptidyl-prolyl cis-trans isomerase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000016gene258079266873-
GWHAAZE00000016mRNA258079266873-
GWHAAZE00000016exon258079258181-
GWHAAZE00000016exon258649258759-
GWHAAZE00000016exon259258259368-
GWHAAZE00000016exon260005260142-
GWHAAZE00000016exon260366260500-
GWHAAZE00000016exon260590260809-
GWHAAZE00000016exon260907260944-
GWHAAZE00000016exon261792261983-
GWHAAZE00000016exon262293262463-
GWHAAZE00000016exon262580262735-
GWHAAZE00000016exon263057263177-
GWHAAZE00000016exon264127264230-
GWHAAZE00000016exon264961265241-
GWHAAZE00000016exon266835266873-
GWHAAZE00000016CDS266835266873-
GWHAAZE00000016CDS264961265241-
GWHAAZE00000016CDS264127264230-
GWHAAZE00000016CDS263057263177-
GWHAAZE00000016CDS262580262735-
GWHAAZE00000016CDS262293262463-
GWHAAZE00000016CDS261792261983-
GWHAAZE00000016CDS260907260944-
GWHAAZE00000016CDS260590260809-
GWHAAZE00000016CDS260366260500-
GWHAAZE00000016CDS260005260142-
GWHAAZE00000016CDS259258259368-
GWHAAZE00000016CDS258649258759-
GWHAAZE00000016CDS258079258181-
Transcript Sequence

Network for GWHGAAZE032295

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0163
CFinderModule0207


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF17800.2NPL45874.90E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.148
SRR3591710White floral bud1.237
SRR3591711White flower0.019
SRR3591712Green floral bud2.782
SRR3591713Yellow flower0.042
SRP173429 SRR8316895Juvenile bud stage 5.178
SRR8316896Juvenile bud stage 7.847
SRR8316897Juvenile bud stage 2.434
SRR8316894Third green stage 3.294
SRR8316900Third green stage 5.749
SRR8316901Third green stage 6.200
SRR8316898Complete white stage 1.001
SRR8316899Complete white stage 4.191
SRR8316903Complete white stage 2.973
SRR8316902Silver flowering stage1.092
SRR8316904Silver flowering stage1.858
SRR8316905Silver flowering stage0.666
SRR8316906Gold flowering stage 1.429
SRR8316907Gold flowering stage 2.250
SRR8316908Gold flowering stage 1.308
SRP132670SRR6706286Control4.470
SRR6706287Light intensity 50%5.401
SRR6706288Light intensity 20%5.154
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.704
CNS0095593Slightly white alabastrum(diploid) 28.986
CNS0095594Slightly white alabastrum(diploid) 39.828
CNS0095595Whole white alabastrum(diploid) 26.251
CNS0095596Whole white alabastrum(diploid) 36.511
CNS0095597Whole white alabastrum(diploid) 46.140
CNS0095598Silvery flower (diploied) 13.464
CNS0095599Silvery flower (diploied) 23.158
CNS0095600Silvery flower (diploied) 31.028
CNS0095601Golden flower (diploid) 12.051
CNS0095602Golden flower (diploid) 21.194
CNS0095603Golden flower (diploid) 30.761
CNS0095604Slightly white alabastrum(tetraploid) 11.311
CNS0095605Slightly white alabastrum(tetraploid) 21.130
CNS0095606Slightly white alabastrum(tetraploid) 30.053
CNS0095607Whole white alabastrum(tetraploid) 10.812
CNS0095608Whole white alabastrum(tetraploid) 20.587
CNS0095609Whole white alabastrum(tetraploid) 30.400
CNS0095610Silvery flower (tetraploid) 10.371
CNS0095611Silvery flower (tetraploid) 20.102
CNS0095612Silvery flower (tetraploid) 30.223
CNS0095613Golden flower (tetraploid) 10.126
CNS0095614Golden flower (tetraploid) 20.079
CNS0095615Golden flower (tetraploid) 30.078
CRA001975CRR073297Stem 16.794
CRR073298Stem 26.040
CRR073299Stem 31.502
CRR073300Leaf 17.524
CRR073301Leaf 26.896
CRR073302Leaf 31.329
CRR073303Juvenile bud 11.671
CRR073304Juvenile bud 20.856
CRR073305Juvenile bud 30.867
CRR073306Third green 10.181
CRR073307Third green 20.421
CRR073308Third green 30.224
CRR073309Second white 10.208
CRR073310Second white 20.182
CRR073311Second white 30.282
CRR073312Silver flowering 10.078
CRR073313Silver flowering 20.083
CRR073314Silver flowering 30.197
CRR073315Gold flowering 10.213
CRR073316Gold flowering 20.926
CRR073317Gold flowering 30.199
CRR073318Tawny withering 13.163
CRR073319Tawny withering 23.359
CRR073320Tawny withering 32.786