Detail information of GWHGAAZE032349


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010241033.13.36433E-45PREDICTED: mediator-associated protein 1-like [Nelumbo nucifera]
trEMBLtr|Q94IK2|Q94IK2_SOLTU5E-44Storekeeper protein {ECO:0000313|EMBL:CAC39398.1}
TAIR10AT4G00390.16E-17DNA-binding storekeeper protein-related transcriptional regulator

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000018gene303494304504-
GWHAAZE00000018mRNA303494304504-
GWHAAZE00000018exon303494304504-
GWHAAZE00000018CDS303494304504-
Transcript Sequence

Network for GWHGAAZE032349

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0040


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04504.15DUF573871798.70E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGeBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 25.033
SRR8316896Juvenile bud stage 30.462
SRR8316897Juvenile bud stage 1.065
SRR8316894Third green stage 14.521
SRR8316900Third green stage 48.679
SRR8316901Third green stage 40.636
SRR8316898Complete white stage 11.668
SRR8316899Complete white stage 62.322
SRR8316903Complete white stage 20.838
SRR8316902Silver flowering stage9.484
SRR8316904Silver flowering stage14.164
SRR8316905Silver flowering stage7.077
SRR8316906Gold flowering stage 19.546
SRR8316907Gold flowering stage 17.718
SRR8316908Gold flowering stage 5.642
SRP132670SRR6706286Control23.936
SRR6706287Light intensity 50%25.052
SRR6706288Light intensity 20%26.409
CNP0000432CNS0095592Slightly white alabastrum(diploid) 130.210
CNS0095593Slightly white alabastrum(diploid) 229.681
CNS0095594Slightly white alabastrum(diploid) 323.231
CNS0095595Whole white alabastrum(diploid) 226.072
CNS0095596Whole white alabastrum(diploid) 322.519
CNS0095597Whole white alabastrum(diploid) 423.162
CNS0095598Silvery flower (diploied) 126.721
CNS0095599Silvery flower (diploied) 224.662
CNS0095600Silvery flower (diploied) 322.458
CNS0095601Golden flower (diploid) 120.289
CNS0095602Golden flower (diploid) 219.627
CNS0095603Golden flower (diploid) 319.965
CNS0095604Slightly white alabastrum(tetraploid) 10.763
CNS0095605Slightly white alabastrum(tetraploid) 21.863
CNS0095606Slightly white alabastrum(tetraploid) 30.094
CNS0095607Whole white alabastrum(tetraploid) 10.482
CNS0095608Whole white alabastrum(tetraploid) 20.498
CNS0095609Whole white alabastrum(tetraploid) 30.206
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.001
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 119.230
CRR073298Stem 221.143
CRR073299Stem 317.834
CRR073300Leaf 124.692
CRR073301Leaf 223.014
CRR073302Leaf 313.810
CRR073303Juvenile bud 124.159
CRR073304Juvenile bud 215.673
CRR073305Juvenile bud 328.226
CRR073306Third green 12.808
CRR073307Third green 23.022
CRR073308Third green 32.451
CRR073309Second white 14.556
CRR073310Second white 24.341
CRR073311Second white 34.268
CRR073312Silver flowering 12.120
CRR073313Silver flowering 20.468
CRR073314Silver flowering 31.799
CRR073315Gold flowering 15.146
CRR073316Gold flowering 26.501
CRR073317Gold flowering 33.602
CRR073318Tawny withering 123.859
CRR073319Tawny withering 214.015
CRR073320Tawny withering 329.416