Gene detail

Detail information of GWHGAAZE032373

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011099164.1	2.0548E-143	PREDICTED: putative receptor-like protein kinase At5g39000 [Sesamum indicum]
COG	YP_001958461.1	1E-23	hypothetical protein Aasi_1443
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	1E-105	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A068U2D1\|A0A068U2D1_COFCA	5E-135	Coffea canephora DH200=94 genomic scaffold, scaffold_8 {ECO:0000313\|EMBL:CDP02334.1}
TAIR10	AT3G51550.1	7E-93	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000020	gene	199550	202464	-
GWHAAZE00000020	mRNA	199550	202464	-
GWHAAZE00000020	exon	201048	202464	-
GWHAAZE00000020	exon	200468	200586	-
GWHAAZE00000020	exon	199550	199855	-
GWHAAZE00000020	CDS	201048	202464	-
GWHAAZE00000020	CDS	200468	200586	-
GWHAAZE00000020	CDS	199550	199855	-

Transcript Sequence
>GWHTAAZE032411 ATGGGCTTCCATTTTGGCCTTGTGAACATGATTGCAACTGCAGTGATAATTATAATCACTACATTGAATATCATAGTCTATAAACTTCGACAACTTCGTGACGCAAACTTTGCCAAGAATTCGGACATTTCATCATCCCAACAAATAGCAGAAGCAAACCTTGGCGATAATTTAGAAGTATTAACACCGCAACAACACCAGGAAGTGAACCTTGGCGAGGATTCAAGCATACCACCGTCGTTGAAATCAGAACAATTATGCCGTCACTTTTCGCTTGCTCATATCCTACTGGCCACCAACAACTTTGACGATGCATTAATCATTGGTCAGGGTGGATTTGGGAAGGTGTACAAAGGGGTCATCGATGATGGGACAGTTACTGTTGCCATAAAGAGGTTAAGTCCTACGTCCAAACAAGGGGCACCCCAATTTTGGACAGAGGTGGAGTTGCTTTCTAAATTTCGGCACAGCCATCTTGTTTCACTAATTGGTTACTGTAACAATTGCGATGAGATGATACTTGTTTATGAGTACATGGCTAGTGGAACCCTCGCGGATCATCTGTACAAACTTGGTCTGAATGGTAATAATTCTCTAACCTTGTCTTGGGTGCAGCGCATAAAGATTTGCATTGGGGCAGCACGGGGTTTGGATTACCTTCATACCGGTACGGGTATCCATGATAGGGTCATTCATCGTGACTTGAAGAGCTCAAACATTCTATTGGATGATAGCTGGGCAGCTAAGGTATCAGATTTTGGGCTGTCTAAAATTGGCCCGGCAAATCAGTCCGCCTCCGCCTCATCACATGTCAGTACCAACGTCAAAGGCACATTTGGGTATGTGGATCCTGAGTATTTGGTGACCCATAGACTTACTCGAAAGTCTGACGTTTACTCCTTTGGCGTTGTCTTGTTAGAAGTGTTGTCCGGGAGGCGGGCTGTAGATTTAAAACGCTGTGAGGAGCAGTGGGGTCTTGCTGGATGGGCCAAAGAATGCATAAAGAAAGGAGAACTAGATCAAATTATTGACCCGAATTTGAGATGGCAAATCTTGGCAAGTTCTTTGACAGCATTTGTGAAAATAGCGGATCAATGCTTGCATTATCGTTCGAAAAAACGCCCTACAATGGCTGAAGTGGTGGCCTCGCTTGAGTCCGCATTGGCATTGCAAGAGAGAAGAGATTCTTCAATGTTTGAGGCGGATTTTTTGAATTTAGGAGGGACTTTTGACAACCAAGATAATTCCTTACTAGAATCCGAGGTGAATAATGGTGGTGATGGTGAGCATCTGGGTGAAGAGATAGATAATATTTTGTCATCTGGTGAGGCAAGCAATTTGCAGTCTCGTGTAAGGCCTGCCAGAATGACACCGTTCAAAAGGATGGCGCGGCTGTTTTTCTTTGGGAAATCTCGAGCAAGTGAAATAAGCAACTTGGAATCCCTAGAATATGACTTTGGTACTCTTAAGGTTGCGACAGATAATTTCTCTGATGCTAACAAGCTTGGAAATGGTGCATTTGGAGTTGTGTTCAAGTATATTACCATCTCTCAAAGTTTAGGTTATTTAAATGAAGCTCTTACTAAGAAATTTTCTTTTGTTGGGGGTGCAGATCCAATTAAGCGTGCAACCTTGGATTGGGAACGGCGTTATAAAATCATAATAGGTGTTGCTCGGGGGCTTCTTTATCTTCACGAAGATTCTCCCTTGCGGATTATTCATCGTGATGTCAAACCTCGCAGCATTTTATTAGATGCAGAGATGAACCCTAAAATTTGTGATTTTGCCTTAGCAAAGTTGTGTGATTGGGAAGGGTCTGCAACCAGAATTGTGGGGACTTAG

Network for GWHGAAZE032373

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	108	384	1.20E-46
PF00069.26	Pkinase	545	613	4.10E-11

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.752
	SRR3591706	second leaf	0.079
	SRR3591707	mature leaf	0.139
	SRR3591708	Shoot apex	0.094
	SRR3591709	Stem	1.268
	SRR3591710	White floral bud	0.387
	SRR3591711	White flower	0.447
	SRR3591712	Green floral bud	0.242
	SRR3591713	Yellow flower	0.358
SRP173429	SRR8316895	Juvenile bud stage	0.010
	SRR8316896	Juvenile bud stage	0.025
	SRR8316897	Juvenile bud stage	0.842
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.048
	SRR8316901	Third green stage	0.061
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.107
	SRR8316903	Complete white stage	0.056
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.025
	SRR8316906	Gold flowering stage	0.107
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	1.335
SRP132670	SRR6706286	Control	0.087
	SRR6706287	Light intensity 50%	0.049
	SRR6706288	Light intensity 20%	0.039
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.022
	CNS0095593	Slightly white alabastrum(diploid) 2	0.176
	CNS0095594	Slightly white alabastrum(diploid) 3	0.501
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.415
	CNS0095600	Silvery flower (diploied) 3	0.059
	CNS0095601	Golden flower (diploid) 1	0.315
	CNS0095602	Golden flower (diploid) 2	0.218
	CNS0095603	Golden flower (diploid) 3	0.114
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.052
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.079
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.028
	CNS0095610	Silvery flower (tetraploid) 1	0.355
	CNS0095611	Silvery flower (tetraploid) 2	0.028
	CNS0095612	Silvery flower (tetraploid) 3	0.140
	CNS0095613	Golden flower (tetraploid) 1	0.321
	CNS0095614	Golden flower (tetraploid) 2	0.357
	CNS0095615	Golden flower (tetraploid) 3	0.022
CRA001975	CRR073297	Stem 1	0.029
	CRR073298	Stem 2	0.002
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.129
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.023
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.080
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.026
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.046
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.046
	CRR073318	Tawny withering 1	0.202
	CRR073319	Tawny withering 2	1.166
	CRR073320	Tawny withering 3	0.032