Detail information of GWHGAAZE032392


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002276208.10PREDICTED: uncharacterized protein LOC100257808 [Vitis vinifera]
trEMBLtr|F6HAZ3|F6HAZ3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB49429.1}
TAIR10AT2G31890.10RAP

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000021gene566295571600-
GWHAAZE00000021mRNA566295571600-
GWHAAZE00000021exon566295566427-
GWHAAZE00000021exon569065569147-
GWHAAZE00000021exon569725571600-
GWHAAZE00000021CDS569725571600-
GWHAAZE00000021CDS569065569147-
GWHAAZE00000021CDS566320566427-
GWHAAZE00000021three_prime_UTR566295566319-
Transcript Sequence

Network for GWHGAAZE032392

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08373.11RAP6136697.70E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.946
SRR3591706second leaf29.779
SRR3591707mature leaf40.793
SRR3591708Shoot apex21.706
SRR3591709Stem14.188
SRR3591710White floral bud14.588
SRR3591711White flower17.219
SRR3591712Green floral bud13.618
SRR3591713Yellow flower13.380
SRP173429 SRR8316895Juvenile bud stage 10.028
SRR8316896Juvenile bud stage 8.097
SRR8316897Juvenile bud stage 6.100
SRR8316894Third green stage 5.183
SRR8316900Third green stage 16.219
SRR8316901Third green stage 14.590
SRR8316898Complete white stage 7.524
SRR8316899Complete white stage 19.456
SRR8316903Complete white stage 10.351
SRR8316902Silver flowering stage7.268
SRR8316904Silver flowering stage10.517
SRR8316905Silver flowering stage5.077
SRR8316906Gold flowering stage 19.083
SRR8316907Gold flowering stage 20.290
SRR8316908Gold flowering stage 20.874
SRP132670SRR6706286Control14.789
SRR6706287Light intensity 50%13.684
SRR6706288Light intensity 20%15.338
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.103
CNS0095593Slightly white alabastrum(diploid) 26.099
CNS0095594Slightly white alabastrum(diploid) 36.334
CNS0095595Whole white alabastrum(diploid) 26.668
CNS0095596Whole white alabastrum(diploid) 34.661
CNS0095597Whole white alabastrum(diploid) 45.066
CNS0095598Silvery flower (diploied) 115.720
CNS0095599Silvery flower (diploied) 29.380
CNS0095600Silvery flower (diploied) 322.311
CNS0095601Golden flower (diploid) 111.702
CNS0095602Golden flower (diploid) 220.591
CNS0095603Golden flower (diploid) 318.657
CNS0095604Slightly white alabastrum(tetraploid) 16.256
CNS0095605Slightly white alabastrum(tetraploid) 25.300
CNS0095606Slightly white alabastrum(tetraploid) 316.010
CNS0095607Whole white alabastrum(tetraploid) 14.318
CNS0095608Whole white alabastrum(tetraploid) 23.109
CNS0095609Whole white alabastrum(tetraploid) 311.843
CNS0095610Silvery flower (tetraploid) 122.268
CNS0095611Silvery flower (tetraploid) 222.673
CNS0095612Silvery flower (tetraploid) 313.935
CNS0095613Golden flower (tetraploid) 19.303
CNS0095614Golden flower (tetraploid) 219.235
CNS0095615Golden flower (tetraploid) 317.933
CRA001975CRR073297Stem 122.275
CRR073298Stem 219.344
CRR073299Stem 320.353
CRR073300Leaf 118.873
CRR073301Leaf 219.977
CRR073302Leaf 316.243
CRR073303Juvenile bud 119.091
CRR073304Juvenile bud 218.992
CRR073305Juvenile bud 319.961
CRR073306Third green 13.324
CRR073307Third green 24.498
CRR073308Third green 34.080
CRR073309Second white 15.410
CRR073310Second white 28.680
CRR073311Second white 38.949
CRR073312Silver flowering 15.351
CRR073313Silver flowering 23.864
CRR073314Silver flowering 34.424
CRR073315Gold flowering 140.144
CRR073316Gold flowering 263.929
CRR073317Gold flowering 321.733
CRR073318Tawny withering 112.467
CRR073319Tawny withering 210.985
CRR073320Tawny withering 313.555