Detail information of GWHGAAZE032449


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009788305.12.15629E-69PREDICTED: uncharacterized protein LOC104236126 [Nicotiana sylvestris]
trEMBLtr|A0A068URC8|A0A068URC8_COFCA6E-64Coffea canephora DH200=94 genomic scaffold, scaffold_43 {ECO:0000313|EMBL:CDP10153.1}
TAIR10AT2G27660.14E-26Cysteine/Histidine-rich C1 domain family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000021gene25307032531689-
GWHAAZE00000021mRNA25307032531689-
GWHAAZE00000021exon25307032531689-
GWHAAZE00000021CDS25307032531689-
Transcript Sequence

Network for GWHGAAZE032449

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0118


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03107.17C1_213593.50E-06
PF03107.17C1_21231683.00E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.095
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.249
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.094
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.030
SRR8316896Juvenile bud stage 0.113
SRR8316897Juvenile bud stage 0.272
SRR8316894Third green stage 0.034
SRR8316900Third green stage 0.089
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.099
SRR8316904Silver flowering stage0.087
SRR8316905Silver flowering stage0.055
SRR8316906Gold flowering stage 1.463
SRR8316907Gold flowering stage 1.456
SRR8316908Gold flowering stage 2.392
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.000
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.004
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.106
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.013
CNS0095604Slightly white alabastrum(tetraploid) 10.026
CNS0095605Slightly white alabastrum(tetraploid) 20.074
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.069
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.096
CNS0095614Golden flower (tetraploid) 20.339
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.050
CRR073298Stem 20.148
CRR073299Stem 30.000
CRR073300Leaf 10.000
CRR073301Leaf 20.000
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.014
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.059
CRR073310Second white 20.425
CRR073311Second white 30.922
CRR073312Silver flowering 14.042
CRR073313Silver flowering 27.572
CRR073314Silver flowering 31.523
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000