Detail information of GWHGAAZE032450


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI29160.30unnamed protein product [Vitis vinifera]
COGYP_007245764.10.000000003hypothetical protein Thimo_3471
trEMBLtr|F6HIW7|F6HIW7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB52192.1}
TAIR10AT3G54360.15E-138zinc ion binding

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000021gene25385462543859-
GWHAAZE00000021mRNA25385462543859-
GWHAAZE00000021exon25385462538596-
GWHAAZE00000021exon25392942539443-
GWHAAZE00000021exon25408972541043-
GWHAAZE00000021exon25414382541525-
GWHAAZE00000021exon25428532543004-
GWHAAZE00000021exon25431152543346-
GWHAAZE00000021exon25434312543697-
GWHAAZE00000021exon25437922543859-
GWHAAZE00000021CDS25437922543859-
GWHAAZE00000021CDS25434312543697-
GWHAAZE00000021CDS25431152543346-
GWHAAZE00000021CDS25428532543004-
GWHAAZE00000021CDS25414382541525-
GWHAAZE00000021CDS25408972541043-
GWHAAZE00000021CDS25392942539443-
GWHAAZE00000021CDS25385462538596-
Transcript Sequence

Network for GWHGAAZE032450

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf196.326
SRR3591706second leaf222.862
SRR3591707mature leaf260.335
SRR3591708Shoot apex160.851
SRR3591709Stem168.545
SRR3591710White floral bud234.894
SRR3591711White flower367.258
SRR3591712Green floral bud166.598
SRR3591713Yellow flower677.218
SRP173429 SRR8316895Juvenile bud stage 95.052
SRR8316896Juvenile bud stage 112.572
SRR8316897Juvenile bud stage 71.525
SRR8316894Third green stage 55.046
SRR8316900Third green stage 170.530
SRR8316901Third green stage 154.210
SRR8316898Complete white stage 111.826
SRR8316899Complete white stage 208.322
SRR8316903Complete white stage 169.601
SRR8316902Silver flowering stage204.706
SRR8316904Silver flowering stage262.538
SRR8316905Silver flowering stage172.298
SRR8316906Gold flowering stage 711.641
SRR8316907Gold flowering stage 625.953
SRR8316908Gold flowering stage 643.070
SRP132670SRR6706286Control216.804
SRR6706287Light intensity 50%222.602
SRR6706288Light intensity 20%240.917
CNP0000432CNS0095592Slightly white alabastrum(diploid) 190.335
CNS0095593Slightly white alabastrum(diploid) 286.627
CNS0095594Slightly white alabastrum(diploid) 378.596
CNS0095595Whole white alabastrum(diploid) 288.165
CNS0095596Whole white alabastrum(diploid) 389.465
CNS0095597Whole white alabastrum(diploid) 4101.070
CNS0095598Silvery flower (diploied) 1245.431
CNS0095599Silvery flower (diploied) 2244.125
CNS0095600Silvery flower (diploied) 3541.093
CNS0095601Golden flower (diploid) 1395.886
CNS0095602Golden flower (diploid) 2628.658
CNS0095603Golden flower (diploid) 3618.765
CNS0095604Slightly white alabastrum(tetraploid) 1120.626
CNS0095605Slightly white alabastrum(tetraploid) 2114.407
CNS0095606Slightly white alabastrum(tetraploid) 3182.927
CNS0095607Whole white alabastrum(tetraploid) 172.804
CNS0095608Whole white alabastrum(tetraploid) 287.914
CNS0095609Whole white alabastrum(tetraploid) 3204.476
CNS0095610Silvery flower (tetraploid) 1681.032
CNS0095611Silvery flower (tetraploid) 2948.084
CNS0095612Silvery flower (tetraploid) 3747.906
CNS0095613Golden flower (tetraploid) 1783.653
CNS0095614Golden flower (tetraploid) 2787.589
CNS0095615Golden flower (tetraploid) 31223.154
CRA001975CRR073297Stem 1209.122
CRR073298Stem 2191.827
CRR073299Stem 3229.941
CRR073300Leaf 1197.370
CRR073301Leaf 2188.603
CRR073302Leaf 3207.200
CRR073303Juvenile bud 1245.485
CRR073304Juvenile bud 2227.537
CRR073305Juvenile bud 3281.242
CRR073306Third green 1363.267
CRR073307Third green 2286.827
CRR073308Third green 3298.253
CRR073309Second white 1686.994
CRR073310Second white 2632.921
CRR073311Second white 3717.422
CRR073312Silver flowering 1827.982
CRR073313Silver flowering 2746.643
CRR073314Silver flowering 3676.684
CRR073315Gold flowering 1260.981
CRR073316Gold flowering 2326.756
CRR073317Gold flowering 3228.533
CRR073318Tawny withering 1128.156
CRR073319Tawny withering 2119.989
CRR073320Tawny withering 3118.641