Detail information of GWHGAAZE032501


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277537.12.9746E-131PREDICTED: zinc finger protein WIP2 [Vitis vinifera]
Swissprottr|Q9SVY1|ZWIP2_ARATH1E-127Zinc finger protein WIP2
trEMBLtr|F6HL47|F6HL47_VITVI1E-131Putative uncharacterized protein {ECO:0000313|EMBL:CCB55154.1}
TAIR10AT3G57670.12E-94C2H2-type zinc finger family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000021gene35554643558037-
GWHAAZE00000021mRNA35554643558037-
GWHAAZE00000021exon35554643555901-
GWHAAZE00000021exon35578733558037-
GWHAAZE00000021CDS35578733558037-
GWHAAZE00000021CDS35554643555901-
Transcript Sequence

Network for GWHGAAZE032501

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00096.27zf-C2H239580.012
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.039
SRR3591706second leaf1.316
SRR3591707mature leaf1.291
SRR3591708Shoot apex0.357
SRR3591709Stem3.966
SRR3591710White floral bud18.993
SRR3591711White flower26.882
SRR3591712Green floral bud14.547
SRR3591713Yellow flower4.706
SRP173429 SRR8316895Juvenile bud stage 4.883
SRR8316896Juvenile bud stage 4.290
SRR8316897Juvenile bud stage 3.995
SRR8316894Third green stage 2.082
SRR8316900Third green stage 4.916
SRR8316901Third green stage 5.748
SRR8316898Complete white stage 2.477
SRR8316899Complete white stage 11.575
SRR8316903Complete white stage 5.755
SRR8316902Silver flowering stage1.489
SRR8316904Silver flowering stage2.518
SRR8316905Silver flowering stage1.238
SRR8316906Gold flowering stage 4.276
SRR8316907Gold flowering stage 3.243
SRR8316908Gold flowering stage 2.954
SRP132670SRR6706286Control3.871
SRR6706287Light intensity 50%4.114
SRR6706288Light intensity 20%4.168
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.768
CNS0095593Slightly white alabastrum(diploid) 25.635
CNS0095594Slightly white alabastrum(diploid) 35.966
CNS0095595Whole white alabastrum(diploid) 25.501
CNS0095596Whole white alabastrum(diploid) 35.123
CNS0095597Whole white alabastrum(diploid) 44.215
CNS0095598Silvery flower (diploied) 14.687
CNS0095599Silvery flower (diploied) 25.888
CNS0095600Silvery flower (diploied) 35.783
CNS0095601Golden flower (diploid) 13.134
CNS0095602Golden flower (diploid) 22.906
CNS0095603Golden flower (diploid) 34.678
CNS0095604Slightly white alabastrum(tetraploid) 18.071
CNS0095605Slightly white alabastrum(tetraploid) 25.402
CNS0095606Slightly white alabastrum(tetraploid) 316.558
CNS0095607Whole white alabastrum(tetraploid) 19.497
CNS0095608Whole white alabastrum(tetraploid) 22.717
CNS0095609Whole white alabastrum(tetraploid) 32.131
CNS0095610Silvery flower (tetraploid) 18.595
CNS0095611Silvery flower (tetraploid) 25.825
CNS0095612Silvery flower (tetraploid) 38.370
CNS0095613Golden flower (tetraploid) 10.924
CNS0095614Golden flower (tetraploid) 25.348
CNS0095615Golden flower (tetraploid) 31.268
CRA001975CRR073297Stem 18.317
CRR073298Stem 26.913
CRR073299Stem 34.022
CRR073300Leaf 15.708
CRR073301Leaf 29.070
CRR073302Leaf 37.084
CRR073303Juvenile bud 16.233
CRR073304Juvenile bud 25.842
CRR073305Juvenile bud 313.733
CRR073306Third green 12.355
CRR073307Third green 22.488
CRR073308Third green 33.356
CRR073309Second white 11.912
CRR073310Second white 20.660
CRR073311Second white 30.793
CRR073312Silver flowering 10.114
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.090
CRR073315Gold flowering 10.749
CRR073316Gold flowering 20.145
CRR073317Gold flowering 30.211
CRR073318Tawny withering 11.527
CRR073319Tawny withering 20.296
CRR073320Tawny withering 33.072