Detail information of GWHGAAZE032643


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010047971.13.69652E-33PREDICTED: TMV resistance protein N-like [Eucalyptus grandis]
Swissprottr|Q40392|TMVRN_NICGU0.000002TMV resistance protein N
trEMBLtr|A0A059CNW0|A0A059CNW0_EUCGR9E-31Uncharacterized protein {ECO:0000313|EMBL:KCW80148.1}
TAIR10AT5G36930.24E-14Disease resistance protein (TIR-NBS-LRR class) family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000033gene160945161689-
GWHAAZE00000033mRNA160945161689-
GWHAAZE00000033exon161396161689-
GWHAAZE00000033exon160945161304-
GWHAAZE00000033CDS161396161689-
GWHAAZE00000033CDS160945161304-
Transcript Sequence

Network for GWHGAAZE032643

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0037


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf31.319
SRR3591706second leaf17.614
SRR3591707mature leaf19.518
SRR3591708Shoot apex23.548
SRR3591709Stem32.841
SRR3591710White floral bud15.746
SRR3591711White flower18.684
SRR3591712Green floral bud12.287
SRR3591713Yellow flower15.452
SRP173429 SRR8316895Juvenile bud stage 7.948
SRR8316896Juvenile bud stage 7.377
SRR8316897Juvenile bud stage 5.511
SRR8316894Third green stage 3.975
SRR8316900Third green stage 10.791
SRR8316901Third green stage 10.841
SRR8316898Complete white stage 6.674
SRR8316899Complete white stage 16.181
SRR8316903Complete white stage 9.963
SRR8316902Silver flowering stage6.025
SRR8316904Silver flowering stage10.046
SRR8316905Silver flowering stage3.430
SRR8316906Gold flowering stage 15.235
SRR8316907Gold flowering stage 14.647
SRR8316908Gold flowering stage 13.199
SRP132670SRR6706286Control3.740
SRR6706287Light intensity 50%4.611
SRR6706288Light intensity 20%4.018
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.888
CNS0095593Slightly white alabastrum(diploid) 26.020
CNS0095594Slightly white alabastrum(diploid) 36.429
CNS0095595Whole white alabastrum(diploid) 25.135
CNS0095596Whole white alabastrum(diploid) 36.129
CNS0095597Whole white alabastrum(diploid) 44.831
CNS0095598Silvery flower (diploied) 17.947
CNS0095599Silvery flower (diploied) 28.046
CNS0095600Silvery flower (diploied) 316.824
CNS0095601Golden flower (diploid) 17.306
CNS0095602Golden flower (diploid) 213.612
CNS0095603Golden flower (diploid) 315.488
CNS0095604Slightly white alabastrum(tetraploid) 17.527
CNS0095605Slightly white alabastrum(tetraploid) 25.535
CNS0095606Slightly white alabastrum(tetraploid) 39.563
CNS0095607Whole white alabastrum(tetraploid) 13.804
CNS0095608Whole white alabastrum(tetraploid) 23.337
CNS0095609Whole white alabastrum(tetraploid) 38.602
CNS0095610Silvery flower (tetraploid) 116.030
CNS0095611Silvery flower (tetraploid) 215.237
CNS0095612Silvery flower (tetraploid) 314.187
CNS0095613Golden flower (tetraploid) 17.905
CNS0095614Golden flower (tetraploid) 220.299
CNS0095615Golden flower (tetraploid) 39.732
CRA001975CRR073297Stem 14.436
CRR073298Stem 25.256
CRR073299Stem 33.887
CRR073300Leaf 16.226
CRR073301Leaf 26.496
CRR073302Leaf 34.788
CRR073303Juvenile bud 14.411
CRR073304Juvenile bud 25.649
CRR073305Juvenile bud 35.874
CRR073306Third green 12.629
CRR073307Third green 21.789
CRR073308Third green 33.572
CRR073309Second white 12.612
CRR073310Second white 27.038
CRR073311Second white 33.648
CRR073312Silver flowering 14.517
CRR073313Silver flowering 25.130
CRR073314Silver flowering 33.071
CRR073315Gold flowering 11.480
CRR073316Gold flowering 23.770
CRR073317Gold flowering 31.922
CRR073318Tawny withering 17.109
CRR073319Tawny withering 26.450
CRR073320Tawny withering 36.785