Detail information of GWHGAAZE032736


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010277495.14.86999E-43PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A-like [Nelumbo nucifera]
Swissprottr|Q7XSZ4|PAS2A_ORYSJ5E-44Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A
trEMBLtr|A0A067F375|A0A067F375_CITSI2E-42Uncharacterized protein {ECO:0000313|EMBL:KDO60570.1}
TAIR10AT5G10480.22E-30Protein-tyrosine phosphatase-like, PTPLA

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000040gene223439224606-
GWHAAZE00000040mRNA223439224606-
GWHAAZE00000040exon223439223561-
GWHAAZE00000040exon224340224421-
GWHAAZE00000040exon224506224606-
GWHAAZE00000040CDS224506224606-
GWHAAZE00000040CDS224340224421-
GWHAAZE00000040CDS223439223561-
Transcript Sequence

Network for GWHGAAZE032736

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04387.15PTPLA8944.30E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K10703HACD, PHS1, PAS2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid elongationmap00062
Biosynthesis of unsaturated fatty acidsmap01040

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf39.405
SRR3591706second leaf75.242
SRR3591707mature leaf27.716
SRR3591708Shoot apex70.475
SRR3591709Stem35.097
SRR3591710White floral bud76.267
SRR3591711White flower36.844
SRR3591712Green floral bud70.553
SRR3591713Yellow flower14.581
SRP173429 SRR8316895Juvenile bud stage 35.543
SRR8316896Juvenile bud stage 43.477
SRR8316897Juvenile bud stage 18.498
SRR8316894Third green stage 20.512
SRR8316900Third green stage 65.278
SRR8316901Third green stage 58.076
SRR8316898Complete white stage 52.097
SRR8316899Complete white stage 77.047
SRR8316903Complete white stage 73.198
SRR8316902Silver flowering stage20.815
SRR8316904Silver flowering stage25.207
SRR8316905Silver flowering stage11.181
SRR8316906Gold flowering stage 33.779
SRR8316907Gold flowering stage 34.216
SRR8316908Gold flowering stage 37.879
SRP132670SRR6706286Control54.069
SRR6706287Light intensity 50%50.295
SRR6706288Light intensity 20%63.929
CNP0000432CNS0095592Slightly white alabastrum(diploid) 142.022
CNS0095593Slightly white alabastrum(diploid) 255.921
CNS0095594Slightly white alabastrum(diploid) 341.452
CNS0095595Whole white alabastrum(diploid) 246.311
CNS0095596Whole white alabastrum(diploid) 339.798
CNS0095597Whole white alabastrum(diploid) 435.665
CNS0095598Silvery flower (diploied) 132.203
CNS0095599Silvery flower (diploied) 231.400
CNS0095600Silvery flower (diploied) 342.831
CNS0095601Golden flower (diploid) 131.545
CNS0095602Golden flower (diploid) 230.573
CNS0095603Golden flower (diploid) 332.582
CNS0095604Slightly white alabastrum(tetraploid) 153.088
CNS0095605Slightly white alabastrum(tetraploid) 242.194
CNS0095606Slightly white alabastrum(tetraploid) 394.063
CNS0095607Whole white alabastrum(tetraploid) 125.041
CNS0095608Whole white alabastrum(tetraploid) 220.222
CNS0095609Whole white alabastrum(tetraploid) 353.688
CNS0095610Silvery flower (tetraploid) 137.872
CNS0095611Silvery flower (tetraploid) 242.896
CNS0095612Silvery flower (tetraploid) 3101.404
CNS0095613Golden flower (tetraploid) 137.707
CNS0095614Golden flower (tetraploid) 230.406
CNS0095615Golden flower (tetraploid) 330.086
CRA001975CRR073297Stem 186.428
CRR073298Stem 280.889
CRR073299Stem 376.869
CRR073300Leaf 1106.507
CRR073301Leaf 288.868
CRR073302Leaf 3103.113
CRR073303Juvenile bud 1107.588
CRR073304Juvenile bud 2164.750
CRR073305Juvenile bud 392.969
CRR073306Third green 1132.095
CRR073307Third green 2139.395
CRR073308Third green 3133.541
CRR073309Second white 1126.623
CRR073310Second white 2115.026
CRR073311Second white 373.256
CRR073312Silver flowering 160.505
CRR073313Silver flowering 245.156
CRR073314Silver flowering 336.825
CRR073315Gold flowering 141.059
CRR073316Gold flowering 237.252
CRR073317Gold flowering 350.227
CRR073318Tawny withering 160.322
CRR073319Tawny withering 239.834
CRR073320Tawny withering 369.794