Detail information of GWHGAAZE032908


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKCW88609.10hypothetical protein EUGRSUZ_A00982 [Eucalyptus grandis]
COGYP_005006029.16E-22Dipeptidyl-peptidase I
Swissprottr|P05167|ALEU_HORVU8E-31Thiol protease aleurain (Precursor)
trEMBLtr|A0A059DDR5|A0A059DDR5_EUCGR0Uncharacterized protein {ECO:0000313|EMBL:KCW88609.1}
TAIR10AT1G02305.18E-141Cysteine proteinases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000060gene134709138176-
GWHAAZE00000060mRNA134709138176-
GWHAAZE00000060exon134709134843-
GWHAAZE00000060exon134939134974-
GWHAAZE00000060exon135341135454-
GWHAAZE00000060exon135725135943-
GWHAAZE00000060exon136205136330-
GWHAAZE00000060exon136425136499-
GWHAAZE00000060exon136591136595-
GWHAAZE00000060exon136692136848-
GWHAAZE00000060exon136981137061-
GWHAAZE00000060exon137144137197-
GWHAAZE00000060exon138093138176-
GWHAAZE00000060CDS138093138176-
GWHAAZE00000060CDS137144137197-
GWHAAZE00000060CDS136981137061-
GWHAAZE00000060CDS136692136848-
GWHAAZE00000060CDS136591136595-
GWHAAZE00000060CDS136425136499-
GWHAAZE00000060CDS136205136330-
GWHAAZE00000060CDS135725135943-
GWHAAZE00000060CDS135341135454-
GWHAAZE00000060CDS134939134974-
GWHAAZE00000060CDS134709134843-
Transcript Sequence

Network for GWHGAAZE032908

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08127.14Propeptide_C145872.20E-11
PF00112.24Peptidase_C11053391.10E-67
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01363CTSB Lysosome map04142
Autophagy - animalmap04140
Apoptosismap04210
NOD-like receptor signaling pathwaymap04621
Antigen processing and presentationmap04612
Renin secretionmap04924

Gene Ontology

GO term OntologyName
GO:0006508biological_processproteolysis
GO:0050790biological_processregulation of catalytic activity
GO:0008234molecular_functioncysteine-type peptidase activity
GO:0004197molecular_functioncysteine-type endopeptidase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf403.592
SRR3591706second leaf236.733
SRR3591707mature leaf500.002
SRR3591708Shoot apex238.727
SRR3591709Stem516.998
SRR3591710White floral bud336.281
SRR3591711White flower356.228
SRR3591712Green floral bud293.065
SRR3591713Yellow flower377.755
SRP173429 SRR8316895Juvenile bud stage 174.453
SRR8316896Juvenile bud stage 228.230
SRR8316897Juvenile bud stage 115.173
SRR8316894Third green stage 93.414
SRR8316900Third green stage 313.688
SRR8316901Third green stage 276.194
SRR8316898Complete white stage 210.487
SRR8316899Complete white stage 503.820
SRR8316903Complete white stage 278.460
SRR8316902Silver flowering stage194.694
SRR8316904Silver flowering stage264.657
SRR8316905Silver flowering stage144.183
SRR8316906Gold flowering stage 457.097
SRR8316907Gold flowering stage 444.621
SRR8316908Gold flowering stage 477.679
SRP132670SRR6706286Control479.035
SRR6706287Light intensity 50%433.338
SRR6706288Light intensity 20%457.505
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1241.898
CNS0095593Slightly white alabastrum(diploid) 2236.076
CNS0095594Slightly white alabastrum(diploid) 3238.601
CNS0095595Whole white alabastrum(diploid) 2236.906
CNS0095596Whole white alabastrum(diploid) 3244.455
CNS0095597Whole white alabastrum(diploid) 4252.793
CNS0095598Silvery flower (diploied) 1441.028
CNS0095599Silvery flower (diploied) 2394.760
CNS0095600Silvery flower (diploied) 3626.383
CNS0095601Golden flower (diploid) 1481.559
CNS0095602Golden flower (diploid) 2730.221
CNS0095603Golden flower (diploid) 3729.981
CNS0095604Slightly white alabastrum(tetraploid) 1266.853
CNS0095605Slightly white alabastrum(tetraploid) 2234.895
CNS0095606Slightly white alabastrum(tetraploid) 3368.214
CNS0095607Whole white alabastrum(tetraploid) 1241.351
CNS0095608Whole white alabastrum(tetraploid) 2250.458
CNS0095609Whole white alabastrum(tetraploid) 3359.830
CNS0095610Silvery flower (tetraploid) 1526.303
CNS0095611Silvery flower (tetraploid) 2685.552
CNS0095612Silvery flower (tetraploid) 3529.148
CNS0095613Golden flower (tetraploid) 1319.610
CNS0095614Golden flower (tetraploid) 2499.017
CNS0095615Golden flower (tetraploid) 3363.864
CRA001975CRR073297Stem 1288.580
CRR073298Stem 2261.536
CRR073299Stem 3310.667
CRR073300Leaf 1305.457
CRR073301Leaf 2303.576
CRR073302Leaf 3342.590
CRR073303Juvenile bud 1419.045
CRR073304Juvenile bud 2457.794
CRR073305Juvenile bud 3472.770
CRR073306Third green 1349.241
CRR073307Third green 2369.870
CRR073308Third green 3333.882
CRR073309Second white 1503.917
CRR073310Second white 2258.008
CRR073311Second white 3258.051
CRR073312Silver flowering 1360.251
CRR073313Silver flowering 2368.483
CRR073314Silver flowering 3301.140
CRR073315Gold flowering 1328.902
CRR073316Gold flowering 2349.742
CRR073317Gold flowering 3400.850
CRR073318Tawny withering 1379.626
CRR073319Tawny withering 2333.812
CRR073320Tawny withering 3283.868