Detail information of GWHGAAZE032910


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006444654.18.21057E-73hypothetical protein CICLE_v10021552mg [Citrus clementina]
trEMBLtr|V4VX10|V4VX10_9ROSI3E-73Uncharacterized protein {ECO:0000313|EMBL:ESR57894.1}
TAIR10AT1G02330.12E-47Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000060gene158612164446-
GWHAAZE00000060mRNA158612164446-
GWHAAZE00000060exon164307164446-
GWHAAZE00000060exon163879164036-
GWHAAZE00000060exon158612158799-
GWHAAZE00000060CDS164307164446-
GWHAAZE00000060CDS163879164036-
GWHAAZE00000060CDS158612158799-
Transcript Sequence

Network for GWHGAAZE032910

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0204


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07052.12Hep_5919622.90E-12
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.156
SRR3591706second leaf4.103
SRR3591707mature leaf5.475
SRR3591708Shoot apex18.178
SRR3591709Stem14.330
SRR3591710White floral bud15.179
SRR3591711White flower16.771
SRR3591712Green floral bud15.412
SRR3591713Yellow flower16.149
SRP173429 SRR8316895Juvenile bud stage 24.891
SRR8316896Juvenile bud stage 37.148
SRR8316897Juvenile bud stage 22.898
SRR8316894Third green stage 12.678
SRR8316900Third green stage 41.701
SRR8316901Third green stage 36.365
SRR8316898Complete white stage 12.380
SRR8316899Complete white stage 36.271
SRR8316903Complete white stage 21.248
SRR8316902Silver flowering stage11.377
SRR8316904Silver flowering stage11.553
SRR8316905Silver flowering stage6.206
SRR8316906Gold flowering stage 24.373
SRR8316907Gold flowering stage 26.089
SRR8316908Gold flowering stage 24.878
SRP132670SRR6706286Control9.480
SRR6706287Light intensity 50%9.766
SRR6706288Light intensity 20%9.869
CNP0000432CNS0095592Slightly white alabastrum(diploid) 140.908
CNS0095593Slightly white alabastrum(diploid) 237.037
CNS0095594Slightly white alabastrum(diploid) 341.465
CNS0095595Whole white alabastrum(diploid) 234.873
CNS0095596Whole white alabastrum(diploid) 343.656
CNS0095597Whole white alabastrum(diploid) 436.883
CNS0095598Silvery flower (diploied) 127.332
CNS0095599Silvery flower (diploied) 229.469
CNS0095600Silvery flower (diploied) 323.940
CNS0095601Golden flower (diploid) 133.994
CNS0095602Golden flower (diploid) 220.689
CNS0095603Golden flower (diploid) 321.613
CNS0095604Slightly white alabastrum(tetraploid) 160.759
CNS0095605Slightly white alabastrum(tetraploid) 259.695
CNS0095606Slightly white alabastrum(tetraploid) 366.746
CNS0095607Whole white alabastrum(tetraploid) 148.497
CNS0095608Whole white alabastrum(tetraploid) 244.752
CNS0095609Whole white alabastrum(tetraploid) 348.456
CNS0095610Silvery flower (tetraploid) 134.981
CNS0095611Silvery flower (tetraploid) 233.150
CNS0095612Silvery flower (tetraploid) 333.446
CNS0095613Golden flower (tetraploid) 124.686
CNS0095614Golden flower (tetraploid) 227.327
CNS0095615Golden flower (tetraploid) 317.507
CRA001975CRR073297Stem 117.578
CRR073298Stem 219.853
CRR073299Stem 315.978
CRR073300Leaf 121.343
CRR073301Leaf 223.096
CRR073302Leaf 313.137
CRR073303Juvenile bud 114.153
CRR073304Juvenile bud 212.913
CRR073305Juvenile bud 38.755
CRR073306Third green 16.700
CRR073307Third green 24.178
CRR073308Third green 34.894
CRR073309Second white 11.732
CRR073310Second white 24.155
CRR073311Second white 35.367
CRR073312Silver flowering 14.912
CRR073313Silver flowering 21.427
CRR073314Silver flowering 36.867
CRR073315Gold flowering 15.237
CRR073316Gold flowering 28.214
CRR073317Gold flowering 31.703
CRR073318Tawny withering 113.552
CRR073319Tawny withering 223.736
CRR073320Tawny withering 317.991