Detail information of GWHGAAZE032911


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_008343229.11.30528E-16PREDICTED: integrator complex subunit 10-like protein [Malus domestica]
trEMBLtr|M5XB50|M5XB50_PRUPE2E-16Uncharacterized protein {ECO:0000313|EMBL:EMJ22691.1}
TAIR10AT1G02330.12E-12Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000060gene171173171754-
GWHAAZE00000060mRNA171173171754-
GWHAAZE00000060exon171173171204-
GWHAAZE00000060exon171512171639-
GWHAAZE00000060exon171720171754-
GWHAAZE00000060CDS171720171754-
GWHAAZE00000060CDS171512171639-
GWHAAZE00000060CDS171173171204-
Transcript Sequence

Network for GWHGAAZE032911

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0204


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.584
SRR3591706second leaf10.946
SRR3591707mature leaf6.967
SRR3591708Shoot apex19.670
SRR3591709Stem15.180
SRR3591710White floral bud15.218
SRR3591711White flower20.228
SRR3591712Green floral bud12.928
SRR3591713Yellow flower13.200
SRP173429 SRR8316895Juvenile bud stage 23.255
SRR8316896Juvenile bud stage 28.220
SRR8316897Juvenile bud stage 17.440
SRR8316894Third green stage 11.225
SRR8316900Third green stage 34.229
SRR8316901Third green stage 26.120
SRR8316898Complete white stage 10.505
SRR8316899Complete white stage 34.148
SRR8316903Complete white stage 17.304
SRR8316902Silver flowering stage9.909
SRR8316904Silver flowering stage10.463
SRR8316905Silver flowering stage5.025
SRR8316906Gold flowering stage 23.098
SRR8316907Gold flowering stage 22.166
SRR8316908Gold flowering stage 25.302
SRP132670SRR6706286Control8.332
SRR6706287Light intensity 50%8.742
SRR6706288Light intensity 20%9.192
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.641
CNS0095593Slightly white alabastrum(diploid) 226.448
CNS0095594Slightly white alabastrum(diploid) 326.896
CNS0095595Whole white alabastrum(diploid) 224.156
CNS0095596Whole white alabastrum(diploid) 323.248
CNS0095597Whole white alabastrum(diploid) 423.496
CNS0095598Silvery flower (diploied) 121.927
CNS0095599Silvery flower (diploied) 225.318
CNS0095600Silvery flower (diploied) 318.078
CNS0095601Golden flower (diploid) 122.111
CNS0095602Golden flower (diploid) 216.572
CNS0095603Golden flower (diploid) 317.480
CNS0095604Slightly white alabastrum(tetraploid) 142.962
CNS0095605Slightly white alabastrum(tetraploid) 245.450
CNS0095606Slightly white alabastrum(tetraploid) 349.832
CNS0095607Whole white alabastrum(tetraploid) 139.271
CNS0095608Whole white alabastrum(tetraploid) 229.447
CNS0095609Whole white alabastrum(tetraploid) 345.115
CNS0095610Silvery flower (tetraploid) 134.347
CNS0095611Silvery flower (tetraploid) 222.841
CNS0095612Silvery flower (tetraploid) 321.886
CNS0095613Golden flower (tetraploid) 117.496
CNS0095614Golden flower (tetraploid) 220.535
CNS0095615Golden flower (tetraploid) 310.249
CRA001975CRR073297Stem 119.802
CRR073298Stem 226.871
CRR073299Stem 315.013
CRR073300Leaf 121.759
CRR073301Leaf 226.442
CRR073302Leaf 318.035
CRR073303Juvenile bud 114.318
CRR073304Juvenile bud 215.491
CRR073305Juvenile bud 37.600
CRR073306Third green 15.438
CRR073307Third green 23.465
CRR073308Third green 35.828
CRR073309Second white 12.163
CRR073310Second white 28.391
CRR073311Second white 35.009
CRR073312Silver flowering 14.215
CRR073313Silver flowering 23.466
CRR073314Silver flowering 34.165
CRR073315Gold flowering 13.980
CRR073316Gold flowering 214.397
CRR073317Gold flowering 31.990
CRR073318Tawny withering 115.464
CRR073319Tawny withering 219.768
CRR073320Tawny withering 319.076