Detail information of GWHGAAZE032960


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO46278.19.42174E-86hypothetical protein CISIN_1g026124mg [Citrus sinensis]
Swissprottr|Q9SID1|BBX25_ARATH8E-62B-box zinc finger protein 25 {ECO:0000303|PubMed:19920209}
trEMBLtr|A0A067DTY9|A0A067DTY9_CITSI4E-86Uncharacterized protein {ECO:0000313|EMBL:KDO46278.1}
TAIR10AT2G31380.12E-46salt tolerance homologue

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000075gene674534678091+
GWHAAZE00000075mRNA674534678091+
GWHAAZE00000075exon674534674716+
GWHAAZE00000075exon675935676180+
GWHAAZE00000075exon677161677391+
GWHAAZE00000075exon678062678091+
GWHAAZE00000075CDS674534674716+
GWHAAZE00000075CDS675935676180+
GWHAAZE00000075CDS677161677391+
GWHAAZE00000075CDS678062678091+
Transcript Sequence

Network for GWHGAAZE032960

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00643.25zf-B_box3443.80E-05
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf68.967
SRR3591706second leaf106.054
SRR3591707mature leaf165.566
SRR3591708Shoot apex71.113
SRR3591709Stem64.855
SRR3591710White floral bud29.955
SRR3591711White flower35.775
SRR3591712Green floral bud36.349
SRR3591713Yellow flower26.693
SRP173429 SRR8316895Juvenile bud stage 23.156
SRR8316896Juvenile bud stage 27.904
SRR8316897Juvenile bud stage 25.301
SRR8316894Third green stage 9.673
SRR8316900Third green stage 33.332
SRR8316901Third green stage 39.120
SRR8316898Complete white stage 8.008
SRR8316899Complete white stage 43.698
SRR8316903Complete white stage 13.727
SRR8316902Silver flowering stage10.147
SRR8316904Silver flowering stage12.256
SRR8316905Silver flowering stage7.293
SRR8316906Gold flowering stage 20.478
SRR8316907Gold flowering stage 14.697
SRR8316908Gold flowering stage 24.302
SRP132670SRR6706286Control17.192
SRR6706287Light intensity 50%16.931
SRR6706288Light intensity 20%20.418
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.230
CNS0095593Slightly white alabastrum(diploid) 215.351
CNS0095594Slightly white alabastrum(diploid) 313.712
CNS0095595Whole white alabastrum(diploid) 211.739
CNS0095596Whole white alabastrum(diploid) 38.710
CNS0095597Whole white alabastrum(diploid) 412.727
CNS0095598Silvery flower (diploied) 124.969
CNS0095599Silvery flower (diploied) 224.393
CNS0095600Silvery flower (diploied) 322.039
CNS0095601Golden flower (diploid) 130.034
CNS0095602Golden flower (diploid) 226.176
CNS0095603Golden flower (diploid) 327.943
CNS0095604Slightly white alabastrum(tetraploid) 130.559
CNS0095605Slightly white alabastrum(tetraploid) 225.728
CNS0095606Slightly white alabastrum(tetraploid) 375.922
CNS0095607Whole white alabastrum(tetraploid) 121.377
CNS0095608Whole white alabastrum(tetraploid) 214.020
CNS0095609Whole white alabastrum(tetraploid) 340.683
CNS0095610Silvery flower (tetraploid) 136.089
CNS0095611Silvery flower (tetraploid) 234.728
CNS0095612Silvery flower (tetraploid) 33.912
CNS0095613Golden flower (tetraploid) 117.820
CNS0095614Golden flower (tetraploid) 233.033
CNS0095615Golden flower (tetraploid) 319.365
CRA001975CRR073297Stem 110.674
CRR073298Stem 210.469
CRR073299Stem 315.423
CRR073300Leaf 112.807
CRR073301Leaf 215.231
CRR073302Leaf 314.862
CRR073303Juvenile bud 114.072
CRR073304Juvenile bud 214.079
CRR073305Juvenile bud 317.027
CRR073306Third green 126.416
CRR073307Third green 216.340
CRR073308Third green 314.870
CRR073309Second white 17.389
CRR073310Second white 25.530
CRR073311Second white 35.328
CRR073312Silver flowering 12.439
CRR073313Silver flowering 23.505
CRR073314Silver flowering 33.009
CRR073315Gold flowering 139.895
CRR073316Gold flowering 236.448
CRR073317Gold flowering 332.357
CRR073318Tawny withering 110.430
CRR073319Tawny withering 24.807
CRR073320Tawny withering 35.864