Gene detail

Detail information of GWHGAAZE032988

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CBI16941.3	0	unnamed protein product [Vitis vinifera]
COG	YP_007134290.1	3E-57	(+)-abscisic acid 8'-hydroxylase
Swissprot	tr\|Q43147\|C85A1_SOLLC	0	Cytochrome P450 85A1
trEMBL	tr\|D7SMP3\|D7SMP3_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI16941.3}
TAIR10	AT5G38970.1	0	brassinosteroid-6-oxidase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000081	gene	467685	470775	+
GWHAAZE00000081	mRNA	467685	470775	+
GWHAAZE00000081	exon	467685	467875	+
GWHAAZE00000081	exon	468204	468525	+
GWHAAZE00000081	exon	468674	468823	+
GWHAAZE00000081	exon	469034	469279	+
GWHAAZE00000081	exon	469374	469460	+
GWHAAZE00000081	exon	469560	469638	+
GWHAAZE00000081	exon	470248	470354	+
GWHAAZE00000081	exon	470466	470590	+
GWHAAZE00000081	exon	470688	470775	+
GWHAAZE00000081	CDS	467685	467875	+
GWHAAZE00000081	CDS	468204	468525	+
GWHAAZE00000081	CDS	468674	468823	+
GWHAAZE00000081	CDS	469034	469279	+
GWHAAZE00000081	CDS	469374	469460	+
GWHAAZE00000081	CDS	469560	469638	+
GWHAAZE00000081	CDS	470248	470354	+
GWHAAZE00000081	CDS	470466	470590	+
GWHAAZE00000081	CDS	470688	470775	+

Transcript Sequence
>GWHTAAZE033027 ATGGGTGTTTTAATGGTGATATTGGGGGTAATTTTGGGGATATGTTTTATAAGTACAGCTTTATTGAAATGGAATGAGGTGAGGTATAGGAAGAAAGGTTTGCCTCCTGGTACTATGGGTTGGCCTCTCTTTGGTGAGACCACTGAGTTTCTCAAACAAGGCCCAAGCTTTATGATTAACCAAAGAGCAAGGTATGGAAGTTTTTTCAAATCTCACATATTGGGGTGCCCAACAATAGTATCAATGGATGCAGAGGTGAATAGATACATTCTATTGAATGAGGCAAAAGGGCTTGTACCTGGCTACCCACAATCCATGCTTGACATTTTAGGGAAATGCAATATTGCAGCTGTCCATGGTACCACCCATAAGCATATGAGAGGAGCTTTGCTTTCCCTTGTTAGCCCCACCATTATCAAACAACAACTTTTGCCAAAAATTGACCACTTCATGACATCCCACCTTTCCAATTGGGAGAACAATGTCATTGACATTCAAGAAAAAACCAAAGAGATGGCACTTTTGTCATCGCTAAGCCAAATTGCGGGAATCGAATCTGGCGCGATGTCACAAGCTTTCATGCCAGAGTTTTTTAAGCTAGTATTAGGAACACTTTCGCTTCCTATCAACCTCCCTAACACAAATTATCATCGCGGTTTTCGGGCAAGGAAGAATATTGTTAGCATGTTGGGACAACTTATAGAGGAGAGAAGAGCTTCAAAAGAAACTCATAGTGACATGCTTAGTCTTTTGATGAATGGTGAAGAAAACAGAGATAAACTAAGTGATGAAGAGATAATTGATCAAATTATCACTATTTTGTACTCTGGCTATGAAACTGTTTCTACTACTTCCATGATGGCTGTCAAGTACCTTCATGATCATCCAAAAGTTCTTGAAGAACTTAGAAAAGAACATATGGTGATTAGAGAAAGAAAAGAGGCAGATGATCCTATCAATTGGAACGACTATAAGGCGATGCGCTTCACTCGCGCCGTGATCTATGAGACCTCAAGATTAGCAACAATTGTTAATGGGGTTTTGAGGAAAACTACCAAGGAAATGGAATTGAATGGATTTGTAATTCCTGAAGGATGGAGAATATATGTATACACAAGAGAGATCAATTATGACCCGTGTATATATCCGGATCCACTAACCTTCAATCCGTGGAGATGGCTGGACAAGAGTTTGGACAGCCAAAAAAACTTATTCATATTTGGAGGAGGGACAAGGCAGTGTCCAGGAAAGGAACTAGGAATAGCAGAGATTTCTACTTTCCTTCACTACTTTGTAACTAGATACAGATGGGAAGAAGTTGGGGGAGATAAGCTGATGAAATTTCCAAGAGTTGAAGCACCAAATGGGCTCCACATTAGGGTTTCAACTTACTAG

Network for GWHGAAZE032988

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	35	448	2.90E-57

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09590	CYP85A1, BR6OX1	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Brassinosteroid biosynthesis	map00905

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	9.027
	SRR3591706	second leaf	26.217
	SRR3591707	mature leaf	9.650
	SRR3591708	Shoot apex	7.006
	SRR3591709	Stem	2.299
	SRR3591710	White floral bud	2.721
	SRR3591711	White flower	26.672
	SRR3591712	Green floral bud	0.707
	SRR3591713	Yellow flower	28.393
SRP173429	SRR8316895	Juvenile bud stage	7.013
	SRR8316896	Juvenile bud stage	14.237
	SRR8316897	Juvenile bud stage	6.221
	SRR8316894	Third green stage	2.006
	SRR8316900	Third green stage	2.582
	SRR8316901	Third green stage	6.988
	SRR8316898	Complete white stage	0.350
	SRR8316899	Complete white stage	8.745
	SRR8316903	Complete white stage	0.660
	SRR8316902	Silver flowering stage	4.614
	SRR8316904	Silver flowering stage	5.630
	SRR8316905	Silver flowering stage	3.070
	SRR8316906	Gold flowering stage	14.173
	SRR8316907	Gold flowering stage	4.946
	SRR8316908	Gold flowering stage	19.351
SRP132670	SRR6706286	Control	1.670
	SRR6706287	Light intensity 50%	2.263
	SRR6706288	Light intensity 20%	1.801
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	6.761
	CNS0095593	Slightly white alabastrum(diploid) 2	14.072
	CNS0095594	Slightly white alabastrum(diploid) 3	12.705
	CNS0095595	Whole white alabastrum(diploid) 2	7.811
	CNS0095596	Whole white alabastrum(diploid) 3	0.930
	CNS0095597	Whole white alabastrum(diploid) 4	3.593
	CNS0095598	Silvery flower (diploied) 1	10.563
	CNS0095599	Silvery flower (diploied) 2	18.096
	CNS0095600	Silvery flower (diploied) 3	23.743
	CNS0095601	Golden flower (diploid) 1	14.004
	CNS0095602	Golden flower (diploid) 2	24.159
	CNS0095603	Golden flower (diploid) 3	23.954
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.360
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.201
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.664
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.664
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.817
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.923
	CNS0095610	Silvery flower (tetraploid) 1	20.690
	CNS0095611	Silvery flower (tetraploid) 2	19.532
	CNS0095612	Silvery flower (tetraploid) 3	3.282
	CNS0095613	Golden flower (tetraploid) 1	10.554
	CNS0095614	Golden flower (tetraploid) 2	18.352
	CNS0095615	Golden flower (tetraploid) 3	3.325
CRA001975	CRR073297	Stem 1	1.316
	CRR073298	Stem 2	1.626
	CRR073299	Stem 3	0.815
	CRR073300	Leaf 1	3.593
	CRR073301	Leaf 2	2.746
	CRR073302	Leaf 3	1.803
	CRR073303	Juvenile bud 1	1.183
	CRR073304	Juvenile bud 2	1.642
	CRR073305	Juvenile bud 3	3.234
	CRR073306	Third green 1	0.030
	CRR073307	Third green 2	0.398
	CRR073308	Third green 3	0.596
	CRR073309	Second white 1	0.070
	CRR073310	Second white 2	0.556
	CRR073311	Second white 3	0.655
	CRR073312	Silver flowering 1	0.942
	CRR073313	Silver flowering 2	1.058
	CRR073314	Silver flowering 3	0.297
	CRR073315	Gold flowering 1	5.481
	CRR073316	Gold flowering 2	5.934
	CRR073317	Gold flowering 3	4.049
	CRR073318	Tawny withering 1	12.635
	CRR073319	Tawny withering 2	4.294
	CRR073320	Tawny withering 3	6.474