Detail information of GWHGAAZE032989


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009346725.11.15396E-49PREDICTED: UDP-arabinopyranose mutase 3-like [Pyrus x bretschneideri]
Swissprottr|Q8H8T0|RGP1_ORYSJ4E-50UDP-arabinopyranose mutase 1
trEMBLtr|M0S7Q3|M0S7Q3_MUSAM4E-50Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P13620_001}
TAIR10AT3G02230.14E-41reversibly glycosylated polypeptide 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000081gene475711475950+
GWHAAZE00000081mRNA475711475950+
GWHAAZE00000081exon475711475950+
GWHAAZE00000081CDS475711475950+
Transcript Sequence

Network for GWHGAAZE032989

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03214.14RGP1791.70E-37
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13379RGP, UTM Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.606
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.523
SRR3591709Stem0.282
SRR3591710White floral bud30.851
SRR3591711White flower0.339
SRR3591712Green floral bud266.268
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 23.955
SRR8316896Juvenile bud stage 94.190
SRR8316897Juvenile bud stage 64.858
SRR8316894Third green stage 40.691
SRR8316900Third green stage 178.098
SRR8316901Third green stage 179.608
SRR8316898Complete white stage 0.043
SRR8316899Complete white stage 0.621
SRR8316903Complete white stage 0.560
SRR8316902Silver flowering stage0.259
SRR8316904Silver flowering stage0.493
SRR8316905Silver flowering stage0.157
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control38.460
SRR6706287Light intensity 50%35.183
SRR6706288Light intensity 20%32.612
CNP0000432CNS0095592Slightly white alabastrum(diploid) 139.288
CNS0095593Slightly white alabastrum(diploid) 219.313
CNS0095594Slightly white alabastrum(diploid) 358.734
CNS0095595Whole white alabastrum(diploid) 246.014
CNS0095596Whole white alabastrum(diploid) 353.910
CNS0095597Whole white alabastrum(diploid) 430.212
CNS0095598Silvery flower (diploied) 10.119
CNS0095599Silvery flower (diploied) 20.097
CNS0095600Silvery flower (diploied) 30.457
CNS0095601Golden flower (diploid) 10.168
CNS0095602Golden flower (diploid) 20.118
CNS0095603Golden flower (diploid) 30.498
CNS0095604Slightly white alabastrum(tetraploid) 1152.689
CNS0095605Slightly white alabastrum(tetraploid) 2117.083
CNS0095606Slightly white alabastrum(tetraploid) 30.519
CNS0095607Whole white alabastrum(tetraploid) 1186.231
CNS0095608Whole white alabastrum(tetraploid) 2239.458
CNS0095609Whole white alabastrum(tetraploid) 3315.281
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 21.553
CNS0095612Silvery flower (tetraploid) 32.335
CNS0095613Golden flower (tetraploid) 10.152
CNS0095614Golden flower (tetraploid) 20.220
CNS0095615Golden flower (tetraploid) 30.980
CRA001975CRR073297Stem 112.855
CRR073298Stem 221.462
CRR073299Stem 310.331
CRR073300Leaf 128.553
CRR073301Leaf 228.121
CRR073302Leaf 319.242
CRR073303Juvenile bud 118.820
CRR073304Juvenile bud 221.007
CRR073305Juvenile bud 30.199
CRR073306Third green 11.609
CRR073307Third green 22.098
CRR073308Third green 31.597
CRR073309Second white 10.000
CRR073310Second white 20.094
CRR073311Second white 30.000
CRR073312Silver flowering 12.239
CRR073313Silver flowering 24.341
CRR073314Silver flowering 32.006
CRR073315Gold flowering 11.572
CRR073316Gold flowering 20.681
CRR073317Gold flowering 33.021
CRR073318Tawny withering 11.520
CRR073319Tawny withering 20.514
CRR073320Tawny withering 32.833