Gene detail

Detail information of GWHGAAZE033027

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007014251.1	0	AP2-like ethylene-responsive transcription factor AIL5, putative [Theobroma cacao]
Swissprot	tr\|Q6PQQ3\|AIL5_ARATH	4E-144	AP2-like ethylene-responsive transcription factor AIL5
trEMBL	tr\|A0A061GPU4\|A0A061GPU4_THECC	0	AP2-like ethylene-responsive transcription factor AIL5, putative {ECO:0000313\|EMBL:EOY31870.1}
TAIR10	AT5G57390.1	3E-107	AINTEGUMENTA-like 5

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000083	gene	328222	336460	+
GWHAAZE00000083	mRNA	328222	336460	+
GWHAAZE00000083	exon	328222	328421	+
GWHAAZE00000083	exon	329415	329760	+
GWHAAZE00000083	exon	330866	330948	+
GWHAAZE00000083	exon	333688	333776	+
GWHAAZE00000083	exon	333953	334026	+
GWHAAZE00000083	exon	334430	334480	+
GWHAAZE00000083	exon	334583	334659	+
GWHAAZE00000083	exon	335772	336460	+
GWHAAZE00000083	five_prime_UTR	328222	328303	+
GWHAAZE00000083	CDS	328304	328421	+
GWHAAZE00000083	CDS	329415	329760	+
GWHAAZE00000083	CDS	330866	330948	+
GWHAAZE00000083	CDS	333688	333776	+
GWHAAZE00000083	CDS	333953	334026	+
GWHAAZE00000083	CDS	334430	334480	+
GWHAAZE00000083	CDS	334583	334659	+
GWHAAZE00000083	CDS	335772	336460	+

Transcript Sequence
>GWHTAAZE033066 TTCTCTCTCTAAAAAAAGGATAAAAATTTATATCGCTATTTCCCAAAGAACAACATATCTTTCAACACGCTCATCGACGATAATGGATTCTCCATCTGTTCAGAACTGGCTTGCCTTCTCTCTTTCCAACAACCACCTGCCTTCTCCCTCTGATTCTTCTCAACTCTGCTTCTTTGAAGCTTTCCACACAAACAACCACAGTGGTGATGAAGATGCAAGTGGTGCAACGGAGTTGTCGATACTGACATGCGGTAGCCCAAAACTAGAGGATTTTCTCGGTGGCTCTGGTAGTTCAGGTACCGGAGAAGCCGCCGAGGTTTGTCAGTTTAGTGCCGAAACTGCGGCAGCTGTTTCAGACACTGAAATATATGATTCTGATGAGCTTAAAACTATTGCCGCTAGCTTTCTACGCGGGTTCTCCGGCGAACAACATAGTAATCGCCAAAAGCAGTTGGCGGTGGTGGAGCCACCCCCACTTGAGCCGCCGGCAAAGAAAGCCATTGACACCTTCGGCCAACGGACATCCATCTACCGAGGAGTTACTCGGCATAGGTGGACGGGTAGATATGAAGCTCATTTGTGGGACAACAGCTGTAGGAGAGAAGGGCAAAGTCGTAAAGGCAGACAAGGGGGTTATGATAAAGAAGAGAAAGCAGCTAGGGCTTATGATCTTGCTGCTCTCAAGTACTGGGGTCCGGCCACCACCACAAACTTTCCGGTTATTAACTATGAGAAGGAACTGGAGGAAATGAACAACATGAGTAGGCAGGAATTTGTTGCTTCACTCCGAAGGAAAAGTAGTGGGTTTTCTAGAGGAGCCTCAATCTATAGAGGAGTCACAAGGCACCATCAACATGGTCGTTGGCAAGCAAGAATAGGAAGAGTTGCAGGCAACAAAGATCTTTACCTTGGAACCTTCAGCACACAAGAAGAAGCGGCCGAGGCATACGATATAGCGGCCATAAAGTTCAGAGGACTAAATGCAGTAACGAACTTTGACATGAGCCGTTACGACGTACAAAGCATTGCAAATAGCAATCTCCCCATCGGAGGAATGTCGAACAAATCCAAAACTGCCTCCGACCAATCCCTATCCGACAACAAAAGCCTCGACGGTACCCGATCCGACGACCGAGATCTCTCCTCAGCTTCCTCCGTCACCTTCACATCCCAACCCCAACCACCAACCTTAAGCTTCGCTTTACCCATAAAACAAGACTCAACTGACTACTGGTCCATACTCGGATATCAAAGCCAGAACCAAAACCAGAACCAGAACTACTTTTTTCAGGCTTCGAACAACGGTGCAATGGTGTATCAAGGTACATCTCAATACAGCATGGGGTACCCTAATACTAGTACTATAGTGAATGAGAGTAATGGTGGGGGTTACCTAGAGCAGCACAGCAGTGGTACTTCAAGTACAATACCTTATGCAACTCCCATTGCTATAAATGGGAACAATGTGAATTATGAAGGGCCTTCTAGTTTAGGGAACTGGATTGGTGCTGCTGCTGGAGTTGTACCCTCTCATCACCATTCATTTCAGCCTGCAAAAGCTGCTAACAATCTATCAATGTTTCAGACTCCTATTTTTGGGATGGAATGA

Network for GWHGAAZE033027

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00847.21	AP2	149	204	9.60E-10
PF00847.21	AP2	248	298	3.40E-10

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	AP2/ERF-AP2

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.847
	SRR3591706	second leaf	0.291
	SRR3591707	mature leaf	0.021
	SRR3591708	Shoot apex	3.253
	SRR3591709	Stem	1.873
	SRR3591710	White floral bud	0.182
	SRR3591711	White flower	0.126
	SRR3591712	Green floral bud	1.253
	SRR3591713	Yellow flower	0.012
SRP173429	SRR8316895	Juvenile bud stage	4.768
	SRR8316896	Juvenile bud stage	2.870
	SRR8316897	Juvenile bud stage	1.223
	SRR8316894	Third green stage	0.511
	SRR8316900	Third green stage	0.498
	SRR8316901	Third green stage	0.823
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.120
	SRR8316903	Complete white stage	0.076
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.240
	SRR6706287	Light intensity 50%	0.224
	SRR6706288	Light intensity 20%	0.502
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.919
	CNS0095593	Slightly white alabastrum(diploid) 2	0.992
	CNS0095594	Slightly white alabastrum(diploid) 3	1.816
	CNS0095595	Whole white alabastrum(diploid) 2	0.563
	CNS0095596	Whole white alabastrum(diploid) 3	0.261
	CNS0095597	Whole white alabastrum(diploid) 4	0.195
	CNS0095598	Silvery flower (diploied) 1	0.302
	CNS0095599	Silvery flower (diploied) 2	0.092
	CNS0095600	Silvery flower (diploied) 3	0.064
	CNS0095601	Golden flower (diploid) 1	0.168
	CNS0095602	Golden flower (diploid) 2	0.257
	CNS0095603	Golden flower (diploid) 3	0.056
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.835
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.906
	CNS0095606	Slightly white alabastrum(tetraploid) 3	2.767
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.564
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.192
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.616
	CNS0095610	Silvery flower (tetraploid) 1	0.006
	CNS0095611	Silvery flower (tetraploid) 2	0.364
	CNS0095612	Silvery flower (tetraploid) 3	0.092
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	5.617
	CRR073298	Stem 2	3.873
	CRR073299	Stem 3	6.069
	CRR073300	Leaf 1	0.495
	CRR073301	Leaf 2	0.592
	CRR073302	Leaf 3	0.631
	CRR073303	Juvenile bud 1	0.126
	CRR073304	Juvenile bud 2	0.027
	CRR073305	Juvenile bud 3	1.026
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.026
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.186
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.142
	CRR073316	Gold flowering 2	0.325
	CRR073317	Gold flowering 3	0.037
	CRR073318	Tawny withering 1	2.130
	CRR073319	Tawny withering 2	2.296
	CRR073320	Tawny withering 3	2.432