Gene detail

Detail information of GWHGAAZE033043

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010245118.1	0	PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 [Nelumbo nucifera]
Swissprot	tr\|Q94EI9\|PT314_ARATH	1E-179	Probable sugar phosphate/phosphate translocator At3g14410
trEMBL	tr\|K4CXU0\|K4CXU0_SOLLC	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc10g007610.2.1}
TAIR10	AT3G14410.1	4E-125	Nucleotide/sugar transporter family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000087	gene	100391	105464	+
GWHAAZE00000087	mRNA	100391	105464	+
GWHAAZE00000087	exon	100391	100504	+
GWHAAZE00000087	exon	100920	100954	+
GWHAAZE00000087	exon	101281	101393	+
GWHAAZE00000087	exon	101949	102210	+
GWHAAZE00000087	exon	102829	103094	+
GWHAAZE00000087	exon	104230	104392	+
GWHAAZE00000087	exon	105161	105464	+
GWHAAZE00000087	CDS	100391	100504	+
GWHAAZE00000087	CDS	100920	100954	+
GWHAAZE00000087	CDS	101281	101393	+
GWHAAZE00000087	CDS	101949	102210	+
GWHAAZE00000087	CDS	102829	103094	+
GWHAAZE00000087	CDS	104230	104357	+
GWHAAZE00000087	three_prime_UTR	104358	104392	+
GWHAAZE00000087	three_prime_UTR	105161	105464	+

Transcript Sequence
>GWHTAAZE033082 ATGCAGTGGGTTTTGTCATCGAAAGAGATAAACTTTCCGTATCCTCTTGGATTAACCCTACTCCACATGGTCTTCTCCTCTGTGTTATGTTTCACACTTACCAAAGTTCTGAAGATTATGAAAGTCGAGGAAGGGATGACTGCAGAAATATATGCAACATCCGTCATCCCAATTGGTGCAATGTTTGCAATGACTCTTTGGCTTGGAAACACTGCTTACCTTTATATATCTGTTTCATTTGCACAAATGTTGAAAGCAATAATGCCAGTAGCTGTTTTCATTCTTGGAGTAGCAGCAGGACTCGAAGTGATGAATTTCAGGATGCTTCTCATAATGTCAGTGATAAGTTTTGGAGTTCTGGTGGCTTCGTATGGGGAATTAGATATTAACTGGGTTGGTGTTGTTTACCAAATGGGAGGTGTTGTTGGAGAAGCTTTGAGGCTTATATTCATGGAGATTCTGGTTAAAAGGAAGGGTATCAAACTGAATCCCATATCTGTCATGTACTATGTTAGCCCCTGCAGCGCCCTTTGCTTGTTCATTCCGTGGATTTTTCTGGAGAAGCCAAAGATGGATGCACAGTCATGGAACTTTCATCCTCTCGTGCTAACCCTCAACTCTCTCTGTACTTTTGCTCTCAACCTTTCTGTTTTCCTTGTCATCTCGCATACGAGTGCTTTGACGATTCGTGTTGCTGGAGTTGTCAAGGATTGGGTGGTTGTCTTATTATCAGCCCTTTTGTTTGCGGATACGAAGCTCACTCTCATAAACCTGTTTGGTTATGCCATTGCCATTGCTGGTGTAGCTGCTTACAATAACCATAAGTTGAAAAAGGAAGTGACTCGGGTCGGCTCCAATGAGTCTCAACGCCCTGAATCTATTCCATTGGCTTCCTCCTCATCAACCTCTCAAGACTAGATGTATATGAAGCACAGTCTCACGTGTATTGTAAGATGTTCTATATCCAGGATTTTTTTGGAAAGACCACAGCATTTGTAAGTTGTGTTAAGAAGCTGGTATTATTCATTTTAGGTAAAGCGAAACTGCTAGAGCCAAAGTTATAGTGAAACTCAAATACTCTTTTGTACTACTAAGTTTTCGACGTTATTGGAAAAGTCCAGTGTTACAATTGATGACAATAGAGGTTTGTTAATTGTTTGAATTCTCGACCTGTATACATTTTGCATTCAGCTGCCTTCTAAATCCATTGCGTTTGCCTTTGTTTTAAGAAGCAGCATATATATAGGAATTTATTTA

Network for GWHGAAZE033043

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0149

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03151.17	TPT	12	272	4.60E-25

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	15.130
	SRR3591706	second leaf	7.642
	SRR3591707	mature leaf	5.128
	SRR3591708	Shoot apex	11.166
	SRR3591709	Stem	10.011
	SRR3591710	White floral bud	9.871
	SRR3591711	White flower	6.763
	SRR3591712	Green floral bud	10.397
	SRR3591713	Yellow flower	9.250
SRP173429	SRR8316895	Juvenile bud stage	8.228
	SRR8316896	Juvenile bud stage	11.721
	SRR8316897	Juvenile bud stage	5.262
	SRR8316894	Third green stage	6.046
	SRR8316900	Third green stage	13.669
	SRR8316901	Third green stage	13.983
	SRR8316898	Complete white stage	8.132
	SRR8316899	Complete white stage	19.528
	SRR8316903	Complete white stage	10.854
	SRR8316902	Silver flowering stage	5.106
	SRR8316904	Silver flowering stage	7.395
	SRR8316905	Silver flowering stage	3.192
	SRR8316906	Gold flowering stage	7.581
	SRR8316907	Gold flowering stage	9.760
	SRR8316908	Gold flowering stage	9.093
SRP132670	SRR6706286	Control	6.036
	SRR6706287	Light intensity 50%	6.503
	SRR6706288	Light intensity 20%	7.880
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	6.939
	CNS0095593	Slightly white alabastrum(diploid) 2	10.228
	CNS0095594	Slightly white alabastrum(diploid) 3	9.967
	CNS0095595	Whole white alabastrum(diploid) 2	9.757
	CNS0095596	Whole white alabastrum(diploid) 3	10.055
	CNS0095597	Whole white alabastrum(diploid) 4	8.512
	CNS0095598	Silvery flower (diploied) 1	10.765
	CNS0095599	Silvery flower (diploied) 2	6.586
	CNS0095600	Silvery flower (diploied) 3	8.757
	CNS0095601	Golden flower (diploid) 1	6.689
	CNS0095602	Golden flower (diploid) 2	8.706
	CNS0095603	Golden flower (diploid) 3	7.916
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.003
	CNS0095605	Slightly white alabastrum(tetraploid) 2	7.965
	CNS0095606	Slightly white alabastrum(tetraploid) 3	16.569
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.072
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.348
	CNS0095609	Whole white alabastrum(tetraploid) 3	11.855
	CNS0095610	Silvery flower (tetraploid) 1	7.813
	CNS0095611	Silvery flower (tetraploid) 2	7.800
	CNS0095612	Silvery flower (tetraploid) 3	6.167
	CNS0095613	Golden flower (tetraploid) 1	2.690
	CNS0095614	Golden flower (tetraploid) 2	4.501
	CNS0095615	Golden flower (tetraploid) 3	1.656
CRA001975	CRR073297	Stem 1	9.674
	CRR073298	Stem 2	8.699
	CRR073299	Stem 3	10.304
	CRR073300	Leaf 1	12.147
	CRR073301	Leaf 2	12.168
	CRR073302	Leaf 3	14.642
	CRR073303	Juvenile bud 1	11.796
	CRR073304	Juvenile bud 2	10.480
	CRR073305	Juvenile bud 3	10.680
	CRR073306	Third green 1	3.614
	CRR073307	Third green 2	3.889
	CRR073308	Third green 3	4.079
	CRR073309	Second white 1	4.150
	CRR073310	Second white 2	3.063
	CRR073311	Second white 3	2.160
	CRR073312	Silver flowering 1	2.665
	CRR073313	Silver flowering 2	2.492
	CRR073314	Silver flowering 3	2.557
	CRR073315	Gold flowering 1	3.107
	CRR073316	Gold flowering 2	5.597
	CRR073317	Gold flowering 3	3.998
	CRR073318	Tawny withering 1	12.245
	CRR073319	Tawny withering 2	11.782
	CRR073320	Tawny withering 3	12.213