Detail information of GWHGAAZE033068


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002277074.13.85433E-76PREDICTED: transcription factor TCP13 [Vitis vinifera]
Swissprottr|Q9S7W5|TCP13_ARATH2E-42Transcription factor TCP13
trEMBLtr|F6H492|F6H492_VITVI1E-76Putative uncharacterized protein {ECO:0000313|EMBL:CCB46934.1}
TAIR10AT3G02150.23E-37plastid transcription factor 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene265676266584-
GWHAAZE00000094mRNA265676266584-
GWHAAZE00000094exon265676266584-
GWHAAZE00000094CDS265676266584-
Transcript Sequence

Network for GWHGAAZE033068

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.14TCP381117.10E-27
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.351
SRR3591706second leaf17.582
SRR3591707mature leaf16.811
SRR3591708Shoot apex15.668
SRR3591709Stem6.320
SRR3591710White floral bud3.788
SRR3591711White flower12.196
SRR3591712Green floral bud5.524
SRR3591713Yellow flower5.662
SRP173429 SRR8316895Juvenile bud stage 3.747
SRR8316896Juvenile bud stage 4.802
SRR8316897Juvenile bud stage 2.952
SRR8316894Third green stage 1.695
SRR8316900Third green stage 4.943
SRR8316901Third green stage 4.957
SRR8316898Complete white stage 0.309
SRR8316899Complete white stage 0.923
SRR8316903Complete white stage 0.714
SRR8316902Silver flowering stage5.751
SRR8316904Silver flowering stage4.056
SRR8316905Silver flowering stage3.085
SRR8316906Gold flowering stage 24.116
SRR8316907Gold flowering stage 16.029
SRR8316908Gold flowering stage 15.525
SRP132670SRR6706286Control2.888
SRR6706287Light intensity 50%2.334
SRR6706288Light intensity 20%3.214
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.532
CNS0095593Slightly white alabastrum(diploid) 21.744
CNS0095594Slightly white alabastrum(diploid) 34.173
CNS0095595Whole white alabastrum(diploid) 22.556
CNS0095596Whole white alabastrum(diploid) 34.454
CNS0095597Whole white alabastrum(diploid) 41.092
CNS0095598Silvery flower (diploied) 14.307
CNS0095599Silvery flower (diploied) 23.748
CNS0095600Silvery flower (diploied) 33.917
CNS0095601Golden flower (diploid) 16.028
CNS0095602Golden flower (diploid) 29.679
CNS0095603Golden flower (diploid) 36.747
CNS0095604Slightly white alabastrum(tetraploid) 17.132
CNS0095605Slightly white alabastrum(tetraploid) 25.827
CNS0095606Slightly white alabastrum(tetraploid) 36.271
CNS0095607Whole white alabastrum(tetraploid) 12.275
CNS0095608Whole white alabastrum(tetraploid) 23.104
CNS0095609Whole white alabastrum(tetraploid) 36.380
CNS0095610Silvery flower (tetraploid) 116.296
CNS0095611Silvery flower (tetraploid) 216.946
CNS0095612Silvery flower (tetraploid) 316.882
CNS0095613Golden flower (tetraploid) 116.128
CNS0095614Golden flower (tetraploid) 224.464
CNS0095615Golden flower (tetraploid) 328.156
CRA001975CRR073297Stem 16.323
CRR073298Stem 27.099
CRR073299Stem 36.570
CRR073300Leaf 12.391
CRR073301Leaf 23.355
CRR073302Leaf 32.327
CRR073303Juvenile bud 10.991
CRR073304Juvenile bud 21.713
CRR073305Juvenile bud 30.269
CRR073306Third green 113.323
CRR073307Third green 28.301
CRR073308Third green 310.962
CRR073309Second white 17.592
CRR073310Second white 236.999
CRR073311Second white 320.148
CRR073312Silver flowering 116.965
CRR073313Silver flowering 25.727
CRR073314Silver flowering 38.577
CRR073315Gold flowering 14.544
CRR073316Gold flowering 29.862
CRR073317Gold flowering 30.885
CRR073318Tawny withering 12.102
CRR073319Tawny withering 22.678
CRR073320Tawny withering 31.103