Detail information of GWHGAAZE033082


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCAN71501.10hypothetical protein VITISV_006460 [Vitis vinifera]
COGYP_005032013.14E-67putative zinc protease (mpp-like)
Swissprottr|Q42290|MPPB_ARATH0Probable mitochondrial-processing peptidase subunit beta (Precursor)
trEMBLtr|F6H5N5|F6H5N5_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB47603.1}
TAIR10AT3G02090.13E-162Insulinase (Peptidase family M16) protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene449065452704-
GWHAAZE00000094mRNA449065452704-
GWHAAZE00000094exon452468452704-
GWHAAZE00000094exon451425451589-
GWHAAZE00000094exon450920451071-
GWHAAZE00000094exon450694450802-
GWHAAZE00000094exon449727449825-
GWHAAZE00000094exon449564449629-
GWHAAZE00000094exon449350449457-
GWHAAZE00000094exon449065449151-
GWHAAZE00000094CDS452468452704-
GWHAAZE00000094CDS451425451589-
GWHAAZE00000094CDS450920451071-
GWHAAZE00000094CDS450694450802-
GWHAAZE00000094CDS449727449825-
GWHAAZE00000094CDS449564449629-
GWHAAZE00000094CDS449350449457-
GWHAAZE00000094CDS449065449151-
Transcript Sequence

Network for GWHGAAZE033082

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0218


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00675.21Peptidase_M1611091.70E-36
PF05193.22Peptidase_M16_C1362552.60E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity
GO:0046872molecular_functionmetal ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf198.491
SRR3591706second leaf86.401
SRR3591707mature leaf41.200
SRR3591708Shoot apex158.807
SRR3591709Stem123.110
SRR3591710White floral bud170.585
SRR3591711White flower172.893
SRR3591712Green floral bud213.601
SRR3591713Yellow flower174.701
SRP173429 SRR8316895Juvenile bud stage 111.060
SRR8316896Juvenile bud stage 182.492
SRR8316897Juvenile bud stage 87.075
SRR8316894Third green stage 69.263
SRR8316900Third green stage 236.812
SRR8316901Third green stage 231.197
SRR8316898Complete white stage 86.829
SRR8316899Complete white stage 185.276
SRR8316903Complete white stage 127.434
SRR8316902Silver flowering stage94.128
SRR8316904Silver flowering stage118.521
SRR8316905Silver flowering stage55.827
SRR8316906Gold flowering stage 180.857
SRR8316907Gold flowering stage 188.658
SRR8316908Gold flowering stage 221.148
SRP132670SRR6706286Control147.047
SRR6706287Light intensity 50%153.723
SRR6706288Light intensity 20%167.104
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1161.602
CNS0095593Slightly white alabastrum(diploid) 2160.033
CNS0095594Slightly white alabastrum(diploid) 3148.238
CNS0095595Whole white alabastrum(diploid) 2156.765
CNS0095596Whole white alabastrum(diploid) 3184.469
CNS0095597Whole white alabastrum(diploid) 4144.809
CNS0095598Silvery flower (diploied) 174.074
CNS0095599Silvery flower (diploied) 282.470
CNS0095600Silvery flower (diploied) 3156.378
CNS0095601Golden flower (diploid) 173.112
CNS0095602Golden flower (diploid) 2124.005
CNS0095603Golden flower (diploid) 3117.017
CNS0095604Slightly white alabastrum(tetraploid) 1194.057
CNS0095605Slightly white alabastrum(tetraploid) 2169.467
CNS0095606Slightly white alabastrum(tetraploid) 3183.104
CNS0095607Whole white alabastrum(tetraploid) 1164.929
CNS0095608Whole white alabastrum(tetraploid) 2176.191
CNS0095609Whole white alabastrum(tetraploid) 3218.013
CNS0095610Silvery flower (tetraploid) 1179.463
CNS0095611Silvery flower (tetraploid) 2145.323
CNS0095612Silvery flower (tetraploid) 3185.204
CNS0095613Golden flower (tetraploid) 1115.632
CNS0095614Golden flower (tetraploid) 2152.815
CNS0095615Golden flower (tetraploid) 3128.936
CRA001975CRR073297Stem 1164.622
CRR073298Stem 2153.560
CRR073299Stem 3161.201
CRR073300Leaf 1196.399
CRR073301Leaf 2186.431
CRR073302Leaf 3193.669
CRR073303Juvenile bud 1240.067
CRR073304Juvenile bud 2214.976
CRR073305Juvenile bud 3238.108
CRR073306Third green 1203.103
CRR073307Third green 2168.454
CRR073308Third green 3170.555
CRR073309Second white 1254.624
CRR073310Second white 2161.541
CRR073311Second white 3162.190
CRR073312Silver flowering 1197.844
CRR073313Silver flowering 2233.518
CRR073314Silver flowering 3209.725
CRR073315Gold flowering 161.212
CRR073316Gold flowering 269.230
CRR073317Gold flowering 360.940
CRR073318Tawny withering 1163.197
CRR073319Tawny withering 2125.644
CRR073320Tawny withering 3144.556