Detail information of GWHGAAZE033089


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKHG04367.10putative galacturonosyltransferase 13 -like protein [Gossypium arboreum]
COGYP_003549730.10.0000006glycosyl transferase family protein
Swissprottr|Q8GWT1|GAUTE_ARATH0Probable galacturonosyltransferase 14
trEMBLtr|A0A061EGT3|A0A061EGT3_THECC0Galacturonosyltransferase 13 isoform 1 {ECO:0000313|EMBL:EOY03607.1}
TAIR10AT5G15470.10galacturonosyltransferase 14

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene555557561954+
GWHAAZE00000094mRNA555557561954+
GWHAAZE00000094exon555557555743+
GWHAAZE00000094exon557854557909+
GWHAAZE00000094exon558069558224+
GWHAAZE00000094exon559806560396+
GWHAAZE00000094exon560820560957+
GWHAAZE00000094exon561673561954+
GWHAAZE00000094CDS555557555743+
GWHAAZE00000094CDS557854557909+
GWHAAZE00000094CDS558069558224+
GWHAAZE00000094CDS559806560396+
GWHAAZE00000094CDS560820560957+
GWHAAZE00000094CDS561673561954+
Transcript Sequence

Network for GWHGAAZE033089

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0285


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01501.21Glyco_transf_81653714.60E-40
PF01501.21Glyco_transf_83764422.30E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0016757molecular_functiontransferase activity, transferring glycosyl groups

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf100.264
SRR3591706second leaf17.189
SRR3591707mature leaf12.741
SRR3591708Shoot apex23.615
SRR3591709Stem38.140
SRR3591710White floral bud19.802
SRR3591711White flower24.036
SRR3591712Green floral bud31.353
SRR3591713Yellow flower20.855
SRP173429 SRR8316895Juvenile bud stage 105.571
SRR8316896Juvenile bud stage 118.320
SRR8316897Juvenile bud stage 97.951
SRR8316894Third green stage 12.633
SRR8316900Third green stage 34.774
SRR8316901Third green stage 59.912
SRR8316898Complete white stage 8.501
SRR8316899Complete white stage 71.311
SRR8316903Complete white stage 11.543
SRR8316902Silver flowering stage9.254
SRR8316904Silver flowering stage10.354
SRR8316905Silver flowering stage5.116
SRR8316906Gold flowering stage 19.753
SRR8316907Gold flowering stage 15.639
SRR8316908Gold flowering stage 17.609
SRP132670SRR6706286Control16.647
SRR6706287Light intensity 50%19.310
SRR6706288Light intensity 20%20.183
CNP0000432CNS0095592Slightly white alabastrum(diploid) 142.852
CNS0095593Slightly white alabastrum(diploid) 265.892
CNS0095594Slightly white alabastrum(diploid) 362.836
CNS0095595Whole white alabastrum(diploid) 274.608
CNS0095596Whole white alabastrum(diploid) 324.402
CNS0095597Whole white alabastrum(diploid) 442.229
CNS0095598Silvery flower (diploied) 177.856
CNS0095599Silvery flower (diploied) 2101.164
CNS0095600Silvery flower (diploied) 357.179
CNS0095601Golden flower (diploid) 166.454
CNS0095602Golden flower (diploid) 298.973
CNS0095603Golden flower (diploid) 3100.930
CNS0095604Slightly white alabastrum(tetraploid) 119.193
CNS0095605Slightly white alabastrum(tetraploid) 218.698
CNS0095606Slightly white alabastrum(tetraploid) 327.257
CNS0095607Whole white alabastrum(tetraploid) 118.056
CNS0095608Whole white alabastrum(tetraploid) 218.056
CNS0095609Whole white alabastrum(tetraploid) 321.514
CNS0095610Silvery flower (tetraploid) 111.925
CNS0095611Silvery flower (tetraploid) 212.475
CNS0095612Silvery flower (tetraploid) 321.955
CNS0095613Golden flower (tetraploid) 17.484
CNS0095614Golden flower (tetraploid) 210.362
CNS0095615Golden flower (tetraploid) 316.555
CRA001975CRR073297Stem 164.424
CRR073298Stem 259.862
CRR073299Stem 338.847
CRR073300Leaf 173.282
CRR073301Leaf 292.058
CRR073302Leaf 344.283
CRR073303Juvenile bud 148.515
CRR073304Juvenile bud 250.773
CRR073305Juvenile bud 349.516
CRR073306Third green 129.956
CRR073307Third green 229.901
CRR073308Third green 325.965
CRR073309Second white 120.089
CRR073310Second white 222.806
CRR073311Second white 326.979
CRR073312Silver flowering 149.256
CRR073313Silver flowering 239.887
CRR073314Silver flowering 337.650
CRR073315Gold flowering 147.037
CRR073316Gold flowering 2101.244
CRR073317Gold flowering 353.891
CRR073318Tawny withering 155.895
CRR073319Tawny withering 281.439
CRR073320Tawny withering 346.580