Detail information of GWHGAAZE033096


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009627149.14.9128E-139PREDICTED: uncharacterized protein LOC104117763 [Nicotiana tomentosiformis]
trEMBLtr|M0ZLM9|M0ZLM9_SOLTU4E-138Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400003427}
TAIR10AT3G29270.24E-80RING/U-box superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene699380700156-
GWHAAZE00000094mRNA699380700156-
GWHAAZE00000094exon699380700156-
GWHAAZE00000094CDS699380700156-
Transcript Sequence

Network for GWHGAAZE033096

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13445.7zf-RING_UBOX46866.30E-09
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.569
SRR3591706second leaf6.395
SRR3591707mature leaf11.017
SRR3591708Shoot apex8.343
SRR3591709Stem26.575
SRR3591710White floral bud17.118
SRR3591711White flower18.213
SRR3591712Green floral bud11.877
SRR3591713Yellow flower15.072
SRP173429 SRR8316895Juvenile bud stage 5.440
SRR8316896Juvenile bud stage 8.110
SRR8316897Juvenile bud stage 4.674
SRR8316894Third green stage 3.469
SRR8316900Third green stage 9.201
SRR8316901Third green stage 10.920
SRR8316898Complete white stage 7.259
SRR8316899Complete white stage 16.430
SRR8316903Complete white stage 12.622
SRR8316902Silver flowering stage7.054
SRR8316904Silver flowering stage9.686
SRR8316905Silver flowering stage5.695
SRR8316906Gold flowering stage 21.498
SRR8316907Gold flowering stage 15.818
SRR8316908Gold flowering stage 18.235
SRP132670SRR6706286Control15.017
SRR6706287Light intensity 50%16.113
SRR6706288Light intensity 20%15.410
CNP0000432CNS0095592Slightly white alabastrum(diploid) 19.017
CNS0095593Slightly white alabastrum(diploid) 29.165
CNS0095594Slightly white alabastrum(diploid) 38.747
CNS0095595Whole white alabastrum(diploid) 27.947
CNS0095596Whole white alabastrum(diploid) 35.807
CNS0095597Whole white alabastrum(diploid) 49.213
CNS0095598Silvery flower (diploied) 110.096
CNS0095599Silvery flower (diploied) 29.786
CNS0095600Silvery flower (diploied) 327.963
CNS0095601Golden flower (diploid) 112.677
CNS0095602Golden flower (diploid) 219.355
CNS0095603Golden flower (diploid) 320.889
CNS0095604Slightly white alabastrum(tetraploid) 112.989
CNS0095605Slightly white alabastrum(tetraploid) 210.914
CNS0095606Slightly white alabastrum(tetraploid) 316.550
CNS0095607Whole white alabastrum(tetraploid) 17.837
CNS0095608Whole white alabastrum(tetraploid) 28.715
CNS0095609Whole white alabastrum(tetraploid) 314.752
CNS0095610Silvery flower (tetraploid) 126.670
CNS0095611Silvery flower (tetraploid) 236.860
CNS0095612Silvery flower (tetraploid) 334.216
CNS0095613Golden flower (tetraploid) 123.896
CNS0095614Golden flower (tetraploid) 229.786
CNS0095615Golden flower (tetraploid) 331.818
CRA001975CRR073297Stem 115.690
CRR073298Stem 216.139
CRR073299Stem 313.314
CRR073300Leaf 115.594
CRR073301Leaf 216.339
CRR073302Leaf 311.973
CRR073303Juvenile bud 113.119
CRR073304Juvenile bud 214.272
CRR073305Juvenile bud 321.006
CRR073306Third green 18.556
CRR073307Third green 211.250
CRR073308Third green 38.064
CRR073309Second white 112.590
CRR073310Second white 28.502
CRR073311Second white 313.509
CRR073312Silver flowering 110.868
CRR073313Silver flowering 27.778
CRR073314Silver flowering 310.296
CRR073315Gold flowering 16.633
CRR073316Gold flowering 29.505
CRR073317Gold flowering 38.291
CRR073318Tawny withering 117.663
CRR073319Tawny withering 210.520
CRR073320Tawny withering 319.755