Detail information of GWHGAAZE033097


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004304259.14.2494E-137PREDICTED: uncharacterized protein LOC101302961 [Fragaria vesca subsp. vesca]
trEMBLtr|M0ZLM9|M0ZLM9_SOLTU1E-135Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400003427}
TAIR10AT3G29270.27E-82RING/U-box superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene717279718055-
GWHAAZE00000094mRNA717279718055-
GWHAAZE00000094exon717279718055-
GWHAAZE00000094CDS717279718055-
Transcript Sequence

Network for GWHGAAZE033097

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13445.7zf-RING_UBOX46903.90E-08
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.236
SRR3591706second leaf3.454
SRR3591707mature leaf6.040
SRR3591708Shoot apex11.077
SRR3591709Stem25.083
SRR3591710White floral bud31.539
SRR3591711White flower26.249
SRR3591712Green floral bud18.785
SRR3591713Yellow flower15.285
SRP173429 SRR8316895Juvenile bud stage 15.553
SRR8316896Juvenile bud stage 22.424
SRR8316897Juvenile bud stage 14.292
SRR8316894Third green stage 12.485
SRR8316900Third green stage 37.701
SRR8316901Third green stage 31.243
SRR8316898Complete white stage 33.444
SRR8316899Complete white stage 84.345
SRR8316903Complete white stage 45.186
SRR8316902Silver flowering stage22.431
SRR8316904Silver flowering stage28.505
SRR8316905Silver flowering stage18.318
SRR8316906Gold flowering stage 56.786
SRR8316907Gold flowering stage 41.480
SRR8316908Gold flowering stage 60.487
SRP132670SRR6706286Control38.167
SRR6706287Light intensity 50%38.348
SRR6706288Light intensity 20%39.863
CNP0000432CNS0095592Slightly white alabastrum(diploid) 120.563
CNS0095593Slightly white alabastrum(diploid) 219.493
CNS0095594Slightly white alabastrum(diploid) 320.311
CNS0095595Whole white alabastrum(diploid) 226.849
CNS0095596Whole white alabastrum(diploid) 320.281
CNS0095597Whole white alabastrum(diploid) 432.267
CNS0095598Silvery flower (diploied) 133.164
CNS0095599Silvery flower (diploied) 227.434
CNS0095600Silvery flower (diploied) 379.647
CNS0095601Golden flower (diploid) 139.813
CNS0095602Golden flower (diploid) 269.048
CNS0095603Golden flower (diploid) 373.442
CNS0095604Slightly white alabastrum(tetraploid) 125.306
CNS0095605Slightly white alabastrum(tetraploid) 221.158
CNS0095606Slightly white alabastrum(tetraploid) 324.811
CNS0095607Whole white alabastrum(tetraploid) 136.414
CNS0095608Whole white alabastrum(tetraploid) 237.110
CNS0095609Whole white alabastrum(tetraploid) 325.804
CNS0095610Silvery flower (tetraploid) 135.534
CNS0095611Silvery flower (tetraploid) 272.341
CNS0095612Silvery flower (tetraploid) 344.924
CNS0095613Golden flower (tetraploid) 123.906
CNS0095614Golden flower (tetraploid) 234.566
CNS0095615Golden flower (tetraploid) 345.846
CRA001975CRR073297Stem 141.908
CRR073298Stem 236.671
CRR073299Stem 343.932
CRR073300Leaf 150.037
CRR073301Leaf 235.448
CRR073302Leaf 341.321
CRR073303Juvenile bud 159.058
CRR073304Juvenile bud 246.113
CRR073305Juvenile bud 368.305
CRR073306Third green 129.196
CRR073307Third green 228.157
CRR073308Third green 331.244
CRR073309Second white 152.836
CRR073310Second white 241.591
CRR073311Second white 326.454
CRR073312Silver flowering 129.100
CRR073313Silver flowering 234.469
CRR073314Silver flowering 321.251
CRR073315Gold flowering 136.145
CRR073316Gold flowering 241.691
CRR073317Gold flowering 345.806
CRR073318Tawny withering 159.089
CRR073319Tawny withering 252.733
CRR073320Tawny withering 346.795