Detail information of GWHGAAZE033141


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283468.12.62095E-26PREDICTED: vacuolar amino acid transporter 1 [Vitis vinifera]
trEMBLtr|M1CXE2|M1CXE2_SOLTU5E-27Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400076793}
TAIR10AT5G15240.17E-17Transmembrane amino acid transporter family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene16519291655038-
GWHAAZE00000094mRNA16519291655038-
GWHAAZE00000094exon16548511655038-
GWHAAZE00000094exon16533361653431-
GWHAAZE00000094exon16524311652438-
GWHAAZE00000094exon16522591652352-
GWHAAZE00000094exon16519291652163-
GWHAAZE00000094CDS16548511655038-
GWHAAZE00000094CDS16533361653431-
GWHAAZE00000094CDS16524311652438-
GWHAAZE00000094CDS16522591652352-
GWHAAZE00000094CDS16519291652163-
Transcript Sequence

Network for GWHGAAZE033141

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.19Aa_trans1261978.80E-08
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K15015SLC32A, VGAT GABAergic synapse map04727
Retrograde endocannabinoid signalingmap04723
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.811
SRR3591707mature leaf1.997
SRR3591708Shoot apex0.156
SRR3591709Stem0.257
SRR3591710White floral bud0.213
SRR3591711White flower0.268
SRR3591712Green floral bud0.180
SRR3591713Yellow flower0.029
SRP173429 SRR8316895Juvenile bud stage 0.195
SRR8316896Juvenile bud stage 0.000
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.045
SRR8316901Third green stage 0.000
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.067
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.145
SRR8316908Gold flowering stage 0.045
SRP132670SRR6706286Control0.037
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.000
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.264
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.070
CNS0095599Silvery flower (diploied) 20.088
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.072
CNS0095603Golden flower (diploid) 30.004
CNS0095604Slightly white alabastrum(tetraploid) 10.000
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.175
CNS0095613Golden flower (tetraploid) 10.060
CNS0095614Golden flower (tetraploid) 20.215
CNS0095615Golden flower (tetraploid) 30.057
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.110
CRR073299Stem 30.000
CRR073300Leaf 10.000
CRR073301Leaf 20.000
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.022
CRR073307Third green 20.000
CRR073308Third green 30.013
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.015
CRR073312Silver flowering 10.006
CRR073313Silver flowering 20.081
CRR073314Silver flowering 30.101
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.023
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000