Detail information of GWHGAAZE033142


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283468.10PREDICTED: vacuolar amino acid transporter 1 [Vitis vinifera]
Swissprottr|Q9FKS8|LHT1_ARATH1E-14Lysine histidine transporter 1
trEMBLtr|D7SXA8|D7SXA8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI22205.3}
TAIR10AT5G15240.13E-121Transmembrane amino acid transporter family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene16592341661789-
GWHAAZE00000094mRNA16592341661789-
GWHAAZE00000094exon16592341659749-
GWHAAZE00000094exon16601811660875-
GWHAAZE00000094exon16616181661789-
GWHAAZE00000094CDS16616181661789-
GWHAAZE00000094CDS16601811660875-
GWHAAZE00000094CDS16592341659749-
Transcript Sequence

Network for GWHGAAZE033142

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.19Aa_trans814514.20E-65
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K15015SLC32A, VGAT GABAergic synapse map04727
Retrograde endocannabinoid signalingmap04723
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.740
SRR3591706second leaf0.772
SRR3591707mature leaf1.251
SRR3591708Shoot apex1.249
SRR3591709Stem0.456
SRR3591710White floral bud3.489
SRR3591711White flower11.192
SRR3591712Green floral bud3.370
SRR3591713Yellow flower10.755
SRP173429 SRR8316895Juvenile bud stage 2.320
SRR8316896Juvenile bud stage 0.405
SRR8316897Juvenile bud stage 3.776
SRR8316894Third green stage 0.235
SRR8316900Third green stage 1.773
SRR8316901Third green stage 1.448
SRR8316898Complete white stage 1.903
SRR8316899Complete white stage 10.396
SRR8316903Complete white stage 2.567
SRR8316902Silver flowering stage18.673
SRR8316904Silver flowering stage28.297
SRR8316905Silver flowering stage14.848
SRR8316906Gold flowering stage 63.463
SRR8316907Gold flowering stage 38.771
SRR8316908Gold flowering stage 159.796
SRP132670SRR6706286Control0.141
SRR6706287Light intensity 50%0.246
SRR6706288Light intensity 20%0.215
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.461
CNS0095593Slightly white alabastrum(diploid) 21.647
CNS0095594Slightly white alabastrum(diploid) 32.773
CNS0095595Whole white alabastrum(diploid) 21.779
CNS0095596Whole white alabastrum(diploid) 31.399
CNS0095597Whole white alabastrum(diploid) 41.206
CNS0095598Silvery flower (diploied) 12.351
CNS0095599Silvery flower (diploied) 25.486
CNS0095600Silvery flower (diploied) 36.316
CNS0095601Golden flower (diploid) 12.758
CNS0095602Golden flower (diploid) 27.453
CNS0095603Golden flower (diploid) 36.908
CNS0095604Slightly white alabastrum(tetraploid) 10.548
CNS0095605Slightly white alabastrum(tetraploid) 20.784
CNS0095606Slightly white alabastrum(tetraploid) 30.802
CNS0095607Whole white alabastrum(tetraploid) 10.498
CNS0095608Whole white alabastrum(tetraploid) 21.235
CNS0095609Whole white alabastrum(tetraploid) 30.904
CNS0095610Silvery flower (tetraploid) 15.575
CNS0095611Silvery flower (tetraploid) 26.348
CNS0095612Silvery flower (tetraploid) 376.804
CNS0095613Golden flower (tetraploid) 113.118
CNS0095614Golden flower (tetraploid) 26.133
CNS0095615Golden flower (tetraploid) 322.845
CRA001975CRR073297Stem 10.681
CRR073298Stem 21.514
CRR073299Stem 30.899
CRR073300Leaf 10.274
CRR073301Leaf 20.719
CRR073302Leaf 30.401
CRR073303Juvenile bud 10.046
CRR073304Juvenile bud 20.610
CRR073305Juvenile bud 30.253
CRR073306Third green 163.754
CRR073307Third green 247.955
CRR073308Third green 343.987
CRR073309Second white 1117.733
CRR073310Second white 280.395
CRR073311Second white 372.657
CRR073312Silver flowering 178.830
CRR073313Silver flowering 289.933
CRR073314Silver flowering 366.163
CRR073315Gold flowering 10.099
CRR073316Gold flowering 21.540
CRR073317Gold flowering 31.611
CRR073318Tawny withering 10.774
CRR073319Tawny withering 24.447
CRR073320Tawny withering 30.154