Detail information of GWHGAAZE033144


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283533.17.03137E-93PREDICTED: zinc-finger homeodomain protein 9 [Vitis vinifera]
Swissprottr|Q9LXG0|ZHD8_ARATH2E-69Zinc-finger homeodomain protein 8
trEMBLtr|F6H5T2|F6H5T2_VITVI5E-92Putative uncharacterized protein {ECO:0000313|EMBL:CCB47553.1}
TAIR10AT3G28920.14E-53homeobox protein 34

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene17269121727928+
GWHAAZE00000094mRNA17269121727928+
GWHAAZE00000094exon17269121727928+
GWHAAZE00000094CDS17269121727928+
Transcript Sequence

Network for GWHGAAZE033144

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04770.13ZF-HD_dimer591135.60E-29
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors Familyzf-HD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.441
SRR3591706second leaf70.930
SRR3591707mature leaf62.315
SRR3591708Shoot apex90.571
SRR3591709Stem53.838
SRR3591710White floral bud32.005
SRR3591711White flower29.439
SRR3591712Green floral bud74.280
SRR3591713Yellow flower18.473
SRP173429 SRR8316895Juvenile bud stage 39.629
SRR8316896Juvenile bud stage 36.138
SRR8316897Juvenile bud stage 18.218
SRR8316894Third green stage 23.774
SRR8316900Third green stage 70.991
SRR8316901Third green stage 63.997
SRR8316898Complete white stage 16.840
SRR8316899Complete white stage 71.917
SRR8316903Complete white stage 39.146
SRR8316902Silver flowering stage11.876
SRR8316904Silver flowering stage15.916
SRR8316905Silver flowering stage10.167
SRR8316906Gold flowering stage 27.951
SRR8316907Gold flowering stage 25.622
SRR8316908Gold flowering stage 27.735
SRP132670SRR6706286Control73.236
SRR6706287Light intensity 50%59.738
SRR6706288Light intensity 20%55.770
CNP0000432CNS0095592Slightly white alabastrum(diploid) 154.343
CNS0095593Slightly white alabastrum(diploid) 252.256
CNS0095594Slightly white alabastrum(diploid) 339.818
CNS0095595Whole white alabastrum(diploid) 239.535
CNS0095596Whole white alabastrum(diploid) 339.525
CNS0095597Whole white alabastrum(diploid) 429.441
CNS0095598Silvery flower (diploied) 134.875
CNS0095599Silvery flower (diploied) 222.274
CNS0095600Silvery flower (diploied) 335.200
CNS0095601Golden flower (diploid) 121.697
CNS0095602Golden flower (diploid) 238.484
CNS0095603Golden flower (diploid) 338.995
CNS0095604Slightly white alabastrum(tetraploid) 162.285
CNS0095605Slightly white alabastrum(tetraploid) 256.935
CNS0095606Slightly white alabastrum(tetraploid) 3112.383
CNS0095607Whole white alabastrum(tetraploid) 128.215
CNS0095608Whole white alabastrum(tetraploid) 227.034
CNS0095609Whole white alabastrum(tetraploid) 369.984
CNS0095610Silvery flower (tetraploid) 128.084
CNS0095611Silvery flower (tetraploid) 232.099
CNS0095612Silvery flower (tetraploid) 338.506
CNS0095613Golden flower (tetraploid) 129.081
CNS0095614Golden flower (tetraploid) 230.401
CNS0095615Golden flower (tetraploid) 324.856
CRA001975CRR073297Stem 178.745
CRR073298Stem 277.804
CRR073299Stem 381.221
CRR073300Leaf 183.343
CRR073301Leaf 283.932
CRR073302Leaf 366.153
CRR073303Juvenile bud 173.773
CRR073304Juvenile bud 276.349
CRR073305Juvenile bud 396.019
CRR073306Third green 165.071
CRR073307Third green 242.579
CRR073308Third green 356.207
CRR073309Second white 146.791
CRR073310Second white 238.683
CRR073311Second white 340.859
CRR073312Silver flowering 139.557
CRR073313Silver flowering 226.643
CRR073314Silver flowering 328.201
CRR073315Gold flowering 154.853
CRR073316Gold flowering 264.263
CRR073317Gold flowering 369.581
CRR073318Tawny withering 132.521
CRR073319Tawny withering 222.840
CRR073320Tawny withering 326.706