Detail information of GWHGAAZE033171


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009589859.19.1762E-107PREDICTED: ubiquitin-conjugating enzyme E2 2-like [Nicotiana tomentosiformis]
COGYP_008797956.11E-15ubiquitin-conjugating enzyme E2-like protein
Swissprottr|P35130|UBC2_MEDSA1E-106Ubiquitin-conjugating enzyme E2 2
trEMBLtr|M0ZLF5|M0ZLF5_SOLTU2E-107Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400003320}
TAIR10AT2G02760.14E-83ubiquiting-conjugating enzyme 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000094gene24024322404931-
GWHAAZE00000094mRNA24024322404931-
GWHAAZE00000094exon24024322402560-
GWHAAZE00000094exon24029382403026-
GWHAAZE00000094exon24032792403368-
GWHAAZE00000094exon24046612404686-
GWHAAZE00000094exon24048072404931-
GWHAAZE00000094CDS24048072404931-
GWHAAZE00000094CDS24046612404686-
GWHAAZE00000094CDS24032792403368-
GWHAAZE00000094CDS24029382403026-
GWHAAZE00000094CDS24024322402560-
Transcript Sequence

Network for GWHGAAZE033171

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.27UQ_con81442.80E-51
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10573UBE2A, UBC2, RAD6A Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf127.505
SRR3591706second leaf46.682
SRR3591707mature leaf100.534
SRR3591708Shoot apex81.805
SRR3591709Stem215.206
SRR3591710White floral bud162.622
SRR3591711White flower290.969
SRR3591712Green floral bud128.207
SRR3591713Yellow flower341.673
SRP173429 SRR8316895Juvenile bud stage 101.153
SRR8316896Juvenile bud stage 154.499
SRR8316897Juvenile bud stage 45.483
SRR8316894Third green stage 68.723
SRR8316900Third green stage 230.815
SRR8316901Third green stage 206.837
SRR8316898Complete white stage 150.408
SRR8316899Complete white stage 320.468
SRR8316903Complete white stage 181.349
SRR8316902Silver flowering stage213.595
SRR8316904Silver flowering stage194.372
SRR8316905Silver flowering stage106.416
SRR8316906Gold flowering stage 428.442
SRR8316907Gold flowering stage 394.830
SRR8316908Gold flowering stage 299.528
SRP132670SRR6706286Control175.295
SRR6706287Light intensity 50%163.938
SRR6706288Light intensity 20%168.804
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1250.272
CNS0095593Slightly white alabastrum(diploid) 2235.515
CNS0095594Slightly white alabastrum(diploid) 3255.344
CNS0095595Whole white alabastrum(diploid) 2224.029
CNS0095596Whole white alabastrum(diploid) 3263.469
CNS0095597Whole white alabastrum(diploid) 4231.170
CNS0095598Silvery flower (diploied) 1248.717
CNS0095599Silvery flower (diploied) 2261.799
CNS0095600Silvery flower (diploied) 3410.795
CNS0095601Golden flower (diploid) 1326.533
CNS0095602Golden flower (diploid) 2404.878
CNS0095603Golden flower (diploid) 3392.001
CNS0095604Slightly white alabastrum(tetraploid) 1108.624
CNS0095605Slightly white alabastrum(tetraploid) 2100.063
CNS0095606Slightly white alabastrum(tetraploid) 389.559
CNS0095607Whole white alabastrum(tetraploid) 1114.884
CNS0095608Whole white alabastrum(tetraploid) 2101.227
CNS0095609Whole white alabastrum(tetraploid) 387.481
CNS0095610Silvery flower (tetraploid) 1260.162
CNS0095611Silvery flower (tetraploid) 2274.813
CNS0095612Silvery flower (tetraploid) 3177.771
CNS0095613Golden flower (tetraploid) 1255.527
CNS0095614Golden flower (tetraploid) 2250.530
CNS0095615Golden flower (tetraploid) 3459.105
CRA001975CRR073297Stem 1152.365
CRR073298Stem 2143.448
CRR073299Stem 3127.772
CRR073300Leaf 1162.792
CRR073301Leaf 2173.214
CRR073302Leaf 3151.743
CRR073303Juvenile bud 1190.999
CRR073304Juvenile bud 2155.726
CRR073305Juvenile bud 3158.193
CRR073306Third green 1150.283
CRR073307Third green 2174.627
CRR073308Third green 3143.594
CRR073309Second white 1189.468
CRR073310Second white 2201.507
CRR073311Second white 3143.243
CRR073312Silver flowering 1164.967
CRR073313Silver flowering 2191.554
CRR073314Silver flowering 3141.494
CRR073315Gold flowering 1151.422
CRR073316Gold flowering 2154.444
CRR073317Gold flowering 3105.922
CRR073318Tawny withering 1241.891
CRR073319Tawny withering 2267.301
CRR073320Tawny withering 3228.592